RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 POLR2BP30876 1174 aaKnown RBP13.41□□□□□ -0.26
COPS7A-211ENST00000540408 GBP1P32455 592 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 LHX1P48742 406 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 GPR15P49685 360 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 PDE6CP51160 858 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 DGKEP52429 567 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 CREB5Q02930 508 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 DMC1Q14565 340 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 USP39Q53GS9 565 aaKnown RBP13.41□□□□□ -0.26
COPS7A-211ENST00000540408 CRELD2Q6UXH1 353 aaPredicted RBP13.41□□□□□ -0.26
COPS7A-211ENST00000540408 DYMQ7RTS9 669 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 BRAPQ7Z569 592 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 EFCAB13Q8IY85 973 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 SYCP3Q8IZU3 236 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 PDCL2Q8N4E4 241 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 CSGALNACT2Q8N6G5 542 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 LRRC52Q8N7C0 313 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 SPATA18Q8TC71 538 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 CHFRQ96EP1 664 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 TMX3Q96JJ7 454 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 MYRFLQ96LU7 910 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 ACCSQ96QU6 501 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 FAM213AQ9BRX8 229 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 LSM14BQ9BX40 385 aaKnown RBP13.41□□□□□ -0.26
COPS7A-211ENST00000540408 FBRSL1Q9HCM7 1045 aaKnown RBP13.41□□□□□ -0.26
COPS7A-211ENST00000540408 RXFP3Q9NSD7 469 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 TMLHEQ9NVH6 421 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 EBF1Q9UH73 591 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 GTF3C4Q9UKN8 822 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.41□□□□□ -0.26
COPS7A-211ENST00000540408 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
COPS7A-211ENST00000540408 KIF26AQ9ULI4 1882 aaPredicted RBP13.4□□□□□ -0.26
COPS7A-211ENST00000540408 NOL4O94818 638 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 KRT19P08727 400 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 GAP43P17677 238 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 ADSSP30520 456 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 TXLNAP40222 546 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 RBP5P82980 135 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 SHC2P98077 582 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 KCNB1Q14721 858 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 SF3A1Q15459 793 aaKnown RBP13.4□□□□□ -0.26
COPS7A-211ENST00000540408 INTS6LQ5JSJ4 861 aaKnown RBP13.4□□□□□ -0.26
COPS7A-211ENST00000540408 SDHAF4Q5VUM1 108 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 DAB2IPQ5VWQ8 1189 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 C4orf50Q6ZRC1 276 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 SV2BQ7L1I2 683 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 SFR1Q86XK3 245 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 SCN4BQ8IWT1 228 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 LRRC15Q8TF66 581 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 FUBP3Q96I24 572 aaKnown RBP eCLIP13.4□□□□□ -0.26
COPS7A-211ENST00000540408 CYP2S1Q96SQ9 504 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 DUSP15Q9H1R2 295 aaPredicted RBP13.4□□□□□ -0.26
COPS7A-211ENST00000540408 SMOC1Q9H4F8 434 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 RBAKQ9NYW8 714 aaPredicted RBP13.4□□□□□ -0.26
COPS7A-211ENST00000540408 STK17AQ9UEE5 414 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 ITGA11Q9UKX5 1188 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 SNX9Q9Y5X1 595 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 GREB1Q4ZG55 1949 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 EPG5Q9HCE0 2579 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 SCN1AP35498 2009 aa13.4□□□□□ -0.26
COPS7A-211ENST00000540408 TSC2P49815 1807 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 GCNT3O95395 438 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 NFATC1O95644 943 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 HDCP19113 662 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 ACAT1P24752 427 aaKnown RBP13.39□□□□□ -0.27
COPS7A-211ENST00000540408 MYO1EQ12965 1108 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 ZNF77Q15935 545 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 CFAP221Q4G0U5 840 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 L1TD1Q5T7N2 865 aaKnown RBP13.39□□□□□ -0.27
COPS7A-211ENST00000540408 DPH6Q7L8W6 267 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 BRSK2Q8IWQ3 736 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 TOP6BLQ8N6T0 577 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 C1orf127Q8N9H9 656 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 STKLD1Q8NE28 680 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 TSTD1Q8NFU3 115 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
COPS7A-211ENST00000540408 EDEM2Q9BV94 578 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 GDAP2Q9NXN4 497 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 EHD2Q9NZN4 543 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 L1RE1Q9UN81 338 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 WNT6Q9Y6F9 365 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 ANK1P16157 1881 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 TCHHQ07283 1943 aa13.39□□□□□ -0.27
COPS7A-211ENST00000540408 ZNF638Q14966 1978 aaKnown RBP13.38□□□□□ -0.27
COPS7A-211ENST00000540408 BCLAF3A2AJT9 711 aaKnown RBP13.38□□□□□ -0.27
COPS7A-211ENST00000540408 TMEM191BP0C7N4 346 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 GARTP22102 1010 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 GRIN1Q05586 938 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 ALCAMQ13740 583 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 MAPRE1Q15691 268 aaKnown RBP13.38□□□□□ -0.27
COPS7A-211ENST00000540408 EML3Q32P44 896 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 RRAGBQ5VZM2 374 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 PSAPL1Q6NUJ1 521 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 ADGRF2Q8IZF7 708 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 ARL14EPQ8N8R7 260 aaPredicted RBP13.38□□□□□ -0.27
COPS7A-211ENST00000540408 RIN3Q8TB24 985 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 SH3RF2Q8TEC5 729 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 SAAL1Q96ER3 474 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 ANKRD36BP1Q96IX9 119 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 POLR3BQ9NW08 1133 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms