RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 WDR44Q5JSH3 913 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 BMP8AQ7Z5Y6 402 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 UNC93AQ86WB7 457 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 SLC44A3Q8N4M1 653 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 TTC39CQ8N584 583 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 SHKBP1Q8TBC3 707 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 TCEAL4Q96EI5 215 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 MCRS1Q96EZ8 462 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 TRMT2BQ96GJ1 504 aaKnown RBP14.28□□□□□ -0.12
CCDC130-202ENST00000540216 PCED1BQ96HM7 432 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 GCNAQ96QF7 691 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 ELOVL4Q9GZR5 314 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 SDCBP2Q9H190 292 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 RAB20Q9NX57 234 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 UXTQ9UBK9 157 aaPredicted RBP14.28□□□□□ -0.12
CCDC130-202ENST00000540216 COQ4Q9Y3A0 265 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 NME7Q9Y5B8 376 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 NUMBLQ9Y6R0 609 aa14.28□□□□□ -0.12
CCDC130-202ENST00000540216 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 TRIM66O15016 1216 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 PMM2O15305 246 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 MOSPD3O75425 235 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 ECI2O75521 394 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 ANXA13P27216 316 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 GABRR2P28476 465 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 RAP1GAPP47736 663 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 CDR1P51861 262 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 CDH8P55286 799 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 MARSP56192 900 aaKnown RBP14.27□□□□□ -0.13
CCDC130-202ENST00000540216 STX17P56962 302 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 CCDC142Q17RM4 750 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 ARHGAP15Q53QZ3 475 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 SPOPLQ6IQ16 392 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 PARM1Q6UWI2 310 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 GAREM2Q75VX8 874 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 GIPC2Q8TF65 315 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 RSAD2Q8WXG1 361 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 FGF14Q92915 247 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 ASIC4Q96FT7 647 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 SPATA17Q96L03 361 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 MYRFLQ96LU7 910 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 LRFN3Q9BTN0 628 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 DPEP3Q9H4B8 488 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 SLITRK6Q9H5Y7 841 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 APOBEC3GQ9HC16 384 aaKnown RBP14.27□□□□□ -0.13
CCDC130-202ENST00000540216 ZNF334Q9HCZ1 680 aaPredicted RBP14.27□□□□□ -0.13
CCDC130-202ENST00000540216 EHD2Q9NZN4 543 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 DACH1Q9UI36 760 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 PTPRDP23468 1912 aa14.27□□□□□ -0.13
CCDC130-202ENST00000540216 FAM86C2PA6NEL3 165 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 SLC38A8A6NNN8 435 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 SOBPA7XYQ1 873 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 P4HA2O15460 535 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 NOL4O94818 638 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 MBD3O95983 291 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 CCDC192P0DO97 292 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 HMGA1P17096 107 aaKnown RBP14.26□□□□□ -0.13
CCDC130-202ENST00000540216 BDNFP23560 247 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 DDX6P26196 483 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCDC130-202ENST00000540216 NDST1P52848 882 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 CETN1Q12798 172 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 TEAD2Q15562 447 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 DDR2Q16832 855 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 CBWD6Q4V339 395 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 CBWD3Q5JTY5 395 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 CBWD5Q5RIA9 395 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 SCN4BQ8IWT1 228 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 CRYBG2Q8N1P7 616 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 SEMA4DQ92854 862 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 SMARCD2Q92925 531 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 E2F7Q96AV8 911 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 ELSPBP1Q96BH3 223 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 C8orf48Q96LL4 319 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 ASB16Q96NS5 453 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 ATXN3LQ9H3M9 355 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 TRPV4Q9HBA0 871 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 IL21Q9HBE4 155 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 ZFP14Q9HCL3 533 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 SLC2A4RGQ9NR83 387 aa14.26□□□□□ -0.13
CCDC130-202ENST00000540216 GJA1P17302 382 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 WEE1P30291 646 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 GRIK1P39086 918 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 FMO5P49326 533 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 GPR15P49685 360 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 NLRP12P59046 1061 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 CT47A1Q5JQC4 288 aaPredicted RBP14.25□□□□□ -0.13
CCDC130-202ENST00000540216 FAM78AQ5JUQ0 283 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 ZSCAN18Q8TBC5 510 aaPredicted RBP14.25□□□□□ -0.13
CCDC130-202ENST00000540216 GPR152Q8TDT2 470 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 ELMO3Q96BJ8 720 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 SMARCD1Q96GM5 515 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 NT5C1AQ9BXI3 368 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 SRRTQ9BXP5 876 aaKnown RBP14.25□□□□□ -0.13
CCDC130-202ENST00000540216 WNT16Q9UBV4 365 aa14.25□□□□□ -0.13
CCDC130-202ENST00000540216 F8VP50 259 aa14.24□□□□□ -0.13
CCDC130-202ENST00000540216 NRG2O14511 850 aaPredicted RBP14.24□□□□□ -0.13
CCDC130-202ENST00000540216 CILPO75339 1184 aa14.24□□□□□ -0.13
CCDC130-202ENST00000540216 FCARP24071 287 aa14.24□□□□□ -0.13
CCDC130-202ENST00000540216 ERCC5P28715 1186 aaPredicted RBP14.24□□□□□ -0.13
CCDC130-202ENST00000540216 PFKPQ01813 784 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms