RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 TAF12Q16514 161 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 ME3Q16798 604 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 TPD52L1Q16890 204 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-219ENST00000539952 TCEAL6Q6IPX3 200 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 FSTL4Q6MZW2 842 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 CCDC186Q7Z3E2 898 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 CMTM8Q8IZV2 173 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 ZCCHC14Q8WYQ9 949 aaKnown RBP6.45□□□□□ -1.38
CPSF7-219ENST00000539952 BSNDQ8WZ55 320 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 TCEAL3Q969E4 200 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 ACDQ96AP0 544 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 ZNF830Q96NB3 372 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-219ENST00000539952 ZMAT2Q96NC0 199 aaKnown RBP6.45□□□□□ -1.38
CPSF7-219ENST00000539952 TSPAN18Q96SJ8 248 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 P2RY13Q9BPV8 354 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 MKNK1Q9BUB5 465 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 NUSAP1Q9BXS6 441 aaKnown RBP6.45□□□□□ -1.38
CPSF7-219ENST00000539952 SLC46A2Q9BY10 475 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 MRPL4Q9BYD3 311 aaKnown RBP6.45□□□□□ -1.38
CPSF7-219ENST00000539952 DNAJC25Q9H1X3 360 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 PLEKHA5Q9HAU0 1116 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 ANO10Q9NW15 660 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 CNTN3Q9P232 1028 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 EVLQ9UI08 416 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-219ENST00000539952 USP20Q9Y2K6 914 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 SLC27A5Q9Y2P5 690 aa6.45□□□□□ -1.38
CPSF7-219ENST00000539952 MORC2Q9Y6X9 1032 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-219ENST00000539952 LNP1A1A4G5 178 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 CCDC169A6NNP5 214 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 BECN2A8MW95 431 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 H3BQV1 296 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 MEFVO15553 781 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-219ENST00000539952 ATP8B1O43520 1251 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 XPOTO43592 962 aaKnown RBP6.44□□□□□ -1.38
CPSF7-219ENST00000539952 TOP3BO95985 862 aaKnown RBP6.44□□□□□ -1.38
CPSF7-219ENST00000539952 EGFP01133 1207 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 TYMPP19971 482 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 DDX6P26196 483 aaKnown RBP eCLIP6.44□□□□□ -1.38
CPSF7-219ENST00000539952 KRT2P35908 639 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 AVPR1AP37288 418 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 CBX1P83916 185 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 STK3Q13188 491 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 BYSLQ13895 437 aaKnown RBP6.44□□□□□ -1.38
CPSF7-219ENST00000539952 DMC1Q14565 340 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 VEPH1Q14D04 833 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 PDGFRLQ15198 375 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 STX1AQ16623 288 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 UAP1L1Q3KQV9 507 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 FOXD4L6Q3SYB3 417 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-219ENST00000539952 ANO6Q4KMQ2 910 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 SPDYCQ5MJ68 293 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 STXBP5Q5T5C0 1151 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 CEP135Q66GS9 1140 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 PMS2CLQ68D20 193 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 PKN3Q6P5Z2 889 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 FOXD4L3Q6VB84 417 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-219ENST00000539952 DSTYKQ6XUX3 929 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 CEP120Q8N960 986 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 ATAD1Q8NBU5 361 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 ZNF397Q8NF99 534 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-219ENST00000539952 KIF18AQ8NI77 898 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 C2orf15Q8WU43 125 aaKnown RBP6.44□□□□□ -1.38
CPSF7-219ENST00000539952 LEO1Q8WVC0 666 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-219ENST00000539952 GCNAQ96QF7 691 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 NTPCRQ9BSD7 190 aaKnown RBP6.44□□□□□ -1.38
CPSF7-219ENST00000539952 CDT1Q9H211 546 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 EBF3Q9H4W6 596 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 KIF9Q9HAQ2 790 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 C17orf75Q9HAS0 396 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 CBX8Q9HC52 389 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 TDP1Q9NUW8 608 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 RCOR1Q9UKL0 485 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 VWA8A3KMH1 1905 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 NCANO14594 1321 aa6.44□□□□□ -1.38
CPSF7-219ENST00000539952 MTMR11A4FU01 709 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 EIF4E1BA6NMX2 242 aaKnown RBP6.43□□□□□ -1.38
CPSF7-219ENST00000539952 TNFRSF10BO14763 440 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 DCLK1O15075 740 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 HYAL3O43820 417 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-219ENST00000539952 MED24O75448 989 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 ALDH1A2O94788 518 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 EDN1P05305 212 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 PROZP22891 400 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 LRPAP1P30533 357 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 DHPSP49366 369 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-219ENST00000539952 TUBB4BP68371 445 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 SIM1P81133 766 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-219ENST00000539952 BFSP1Q12934 665 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 PSMD2Q13200 908 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 NR5A1Q13285 461 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 ZNF268Q14587 947 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-219ENST00000539952 ZRSR1Q15695 479 aaKnown RBP6.43□□□□□ -1.38
CPSF7-219ENST00000539952 ZBTB6Q15916 424 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 KYAT1Q16773 422 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 ZNF423Q2M1K9 1284 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 SLC10A6Q3KNW5 377 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 ZNF568Q3ZCX4 644 aa6.43□□□□□ -1.38
CPSF7-219ENST00000539952 SOWAHCQ53LP3 525 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-219ENST00000539952 EARS2Q5JPH6 523 aaKnown RBP6.43□□□□□ -1.38
CPSF7-219ENST00000539952 OVOS1Q6IE37 1185 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms