RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TRIP13Q15645 432 aaPredicted RBP7.65□□□□□ -1.19
MSH6-209ENST00000538136 TRIM65Q6PJ69 517 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 DENND5BQ6ZUT9 1274 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 H2AFVQ71UI9 128 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 CFAP52Q8N1V2 620 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 ANKLE1Q8NAG6 615 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 ZNF507Q8TCN5 953 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 TOP1MTQ969P6 601 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 SLC35C1Q96A29 364 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 PABPC5Q96DU9 382 aaKnown RBP7.65□□□□□ -1.19
MSH6-209ENST00000538136 CGRRF1Q99675 332 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 ULBP1Q9BZM6 244 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 CACNA1BQ00975 2339 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 LINC01553A4QN01 128 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 SCAMP1O15126 338 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 CEP104O60308 925 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 GRM5P41594 1212 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 FXR1P51114 621 aaKnown RBP eCLIP7.64□□□□□ -1.192e-6■■■□□ 14.9
MSH6-209ENST00000538136 SEC13P55735 322 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 TSTA3Q13630 321 aaPredicted RBP7.64□□□□□ -1.19
MSH6-209ENST00000538136 DCLRE1AQ6PJP8 1040 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 PPP1R21Q6ZMI0 780 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 CNGA4Q8IV77 575 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 CCDC97Q96F63 343 aaPredicted RBP7.64□□□□□ -1.19
MSH6-209ENST00000538136 RPRD1AQ96P16 312 aaPredicted RBP7.64□□□□□ -1.19
MSH6-209ENST00000538136 ADAM7Q9H2U9 754 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 APEX2Q9UBZ4 518 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 YBX2Q9Y2T7 364 aaKnown RBP7.64□□□□□ -1.19
MSH6-209ENST00000538136 MYO18BQ8IUG5 2567 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 PTPRJQ12913 1337 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 M0QYT0 321 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 HLTFQ14527 1009 aaKnown RBP eCLIP7.64□□□□□ -1.192e-7■■■□□ 16.9
MSH6-209ENST00000538136 PLEKHG4Q58EX7 1191 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 PPP4R3CPQ6ZMV5 832 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.64□□□□□ -1.19
MSH6-209ENST00000538136 DEFB119Q8N690 84 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 EHBP1Q8NDI1 1231 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 C3orf58Q8NDZ4 430 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 MCEEQ96PE7 176 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 KXD1Q9BQD3 176 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 FBXL5Q9UKA1 691 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 MYH4Q9Y623 1939 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 NAV1Q8NEY1 1877 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 EPHB6O15197 1021 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 EIF3DO15371 548 aaKnown RBP eCLIP7.64□□□□□ -1.19
MSH6-209ENST00000538136 AXLP30530 894 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 SMAD3P84022 425 aaKnown RBP7.64□□□□□ -1.19
MSH6-209ENST00000538136 PTPN11Q06124 597 aaPredicted RBP7.64□□□□□ -1.19
MSH6-209ENST00000538136 ELAVL2Q12926 359 aaKnown RBP7.64□□□□□ -1.19
MSH6-209ENST00000538136 PABPC1LQ4VXU2 614 aaKnown RBP7.64□□□□□ -1.19
MSH6-209ENST00000538136 PPP1R26Q5T8A7 1209 aaPredicted RBP7.64□□□□□ -1.19
MSH6-209ENST00000538136 CARNMT1Q8N4J0 409 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 CRYGNQ8WXF5 182 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 C18orf8Q96DM3 657 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 IGSF21Q96ID5 467 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 TOX2Q96NM4 488 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 ASB7Q9H672 318 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 HCFC2Q9Y5Z7 792 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 ITIH6Q6UXX5 1313 aa7.64□□□□□ -1.19
MSH6-209ENST00000538136 TULP2O00295 520 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 XYLBO75191 536 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 SDC4P31431 198 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 TAF5Q15542 800 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 NFE2Q16621 373 aaPredicted RBP7.63□□□□□ -1.19
MSH6-209ENST00000538136 CENPPQ6IPU0 288 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 CASC4Q6P4E1 433 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 PIGZQ86VD9 579 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 KLHL7Q8IXQ5 586 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 APBB2Q92870 758 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 MBOAT7Q96N66 472 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 CEP41Q9BYV8 373 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 IRX2Q9BZI1 471 aaPredicted RBP7.63□□□□□ -1.19
MSH6-209ENST00000538136 UBN1Q9NPG3 1134 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 NRXN2Q9P2S2 1712 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 ECM29Q5VYK3 1845 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 H7C4K7 107 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 PTGESO14684 152 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 AXIN1O15169 862 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 LYPLA2O95372 231 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 RALAP11233 206 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 PON1P27169 355 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 ROR1Q01973 937 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 IL31Q6EBC2 164 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 ANKS3Q6ZW76 656 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 PEX26Q7Z412 305 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 PDCL2Q8N4E4 241 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 B3GALNT2Q8NCR0 500 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 CEP63Q96MT8 703 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 HAPLN2Q9GZV7 340 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 THAP9Q9H5L6 903 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 TMEM134Q9H6X4 195 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 CHST12Q9NRB3 414 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 METTL5Q9NRN9 209 aaKnown RBP7.63□□□□□ -1.19
MSH6-209ENST00000538136 DNAJC17Q9NVM6 304 aaKnown RBP7.63□□□□□ -1.19
MSH6-209ENST00000538136 XIRP2A4UGR9 3374 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 LGALS16A8MUM7 142 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 DFFAO00273 331 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 MED7O43513 233 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 PRPSAP2O60256 369 aa7.63□□□□□ -1.19
MSH6-209ENST00000538136 YWHAQP27348 245 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 493.3 ms