RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 HORMAD1Q86X24 394 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 CNTNAP4Q9C0A0 1308 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 A8MX80 341 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 ITGB6P18564 788 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 CYP2C19P33261 490 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 PGS1Q32NB8 556 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 SH2D3CQ8N5H7 860 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 ZNF614Q8N883 585 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 FEZF2Q8TBJ5 459 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 WDR35Q9P2L0 1181 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 GPR75-ASB3A0A0A6YYF3 556 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 A0A1W2PQC6 194 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 NFIBO00712 420 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 SYNCRIPO60506 623 aaKnown RBP11.65□□□□□ -0.54
LINC00346-201ENST00000538077 SRGNP10124 158 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 KLRC2P26717 231 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 SPATA4Q8NEY3 305 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 FAM32AQ9Y421 112 aaKnown RBP11.65□□□□□ -0.54
LINC00346-201ENST00000538077 SLC12A8A0AV02 714 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 POLBP06746 335 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 IMPDH2P12268 514 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 KLRC1P26715 233 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 OR9Q1Q8NGQ5 310 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 WNK4Q96J92 1243 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 GIMAP4Q9NUV9 329 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 RNF112Q9ULX5 631 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC00346-201ENST00000538077 RICTORQ6R327 1708 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 CYTH3O43739 400 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 STX3Q13277 289 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 LONP2Q86WA8 852 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 PHACTR4Q8IZ21 702 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 ZNF555Q8NEP9 628 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 SEPT8Q92599 483 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 THAP2Q9H0W7 228 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 KCNQ5Q9NR82 932 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 USP20Q9Y2K6 914 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 hCG_2014768A0A024R1R8 64 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 A0A087WZ62 844 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 TBX3O15119 743 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 EIF3DO15371 548 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC00346-201ENST00000538077 RAD23BP54727 409 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 EPHB3P54753 998 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 POU4F1Q01851 419 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 MAPRE2Q15555 327 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 TEDDM1Q5T9Z0 273 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 SLC30A10Q6XR72 485 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 PRR23CQ6ZRP0 262 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 CLEC4FQ8N1N0 589 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 ZC3H15Q8WU90 426 aaKnown RBP11.65□□□□□ -0.54
LINC00346-201ENST00000538077 ZNF669Q96BR6 464 aaPredicted RBP11.65□□□□□ -0.54
LINC00346-201ENST00000538077 GPRASP2Q96D09 838 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 FDXACB1Q9BRP7 624 aaPredicted RBP11.65□□□□□ -0.54
LINC00346-201ENST00000538077 NDE1Q9NXR1 346 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 FBXL21Q9UKT6 434 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 AGLP35573 1532 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 DDTLA6NHG4 134 aaPredicted RBP11.65□□□□□ -0.54
LINC00346-201ENST00000538077 CBX4O00257 560 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 RHOBTB3O94955 611 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 SUPT20HL2P0C7V6 817 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 DDX5P17844 614 aaKnown RBP11.65□□□□□ -0.54
LINC00346-201ENST00000538077 CHI3L1P36222 383 aaPredicted RBP11.65□□□□□ -0.54
LINC00346-201ENST00000538077 PGM1P36871 562 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 HIC1Q14526 733 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 LLGL2Q6P1M3 1020 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 TMC7Q7Z402 723 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 VPS28Q9UK41 221 aa11.65□□□□□ -0.54
LINC00346-201ENST00000538077 EFCAB14O75071 495 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 PTGER2P43116 358 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 BFSP2Q13515 415 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 GRAMD4Q6IC98 578 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 MRPS31Q92665 395 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 RBM12Q9NTZ6 932 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 UBP1Q9NZI7 540 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 UBQLN1Q9UMX0 589 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 SERPINI2O75830 405 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 TMEM132BQ14DG7 1078 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 CLEC16AQ2KHT3 1053 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 C16orf59Q7L2K0 433 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 CHMP1BQ7LBR1 199 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 APOL2Q9BQE5 337 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 CCSER1Q9C0I3 900 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 PDGFDQ9GZP0 370 aaPredicted RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 PCDHB12Q9Y5F1 795 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 ADCY3O60266 1144 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 MLNP12872 115 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 PNPLA4P41247 253 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 RGS4P49798 205 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 TBL3Q12788 808 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 DNAAF5Q86Y56 855 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 CBWD2Q8IUF1 395 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 GALNT4Q8N4A0 578 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 ZCCHC17Q9NP64 241 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 KCND2Q9NZV8 630 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 PSMC3IPQ9P2W1 217 aaPredicted RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 UVRAGQ9P2Y5 699 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 ZDHHC9Q9Y397 364 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 TRIM17Q9Y577 477 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 OXCT1P55809 520 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 STAT4Q14765 748 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms