RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 OSMRQ99650 979 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 LBHD1Q9BQE6 289 aaPredicted RBP9.16□□□□□ -0.94
UBE3B-208ENST00000538070 B3GNT5Q9BYG0 378 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 ELOVL4Q9GZR5 314 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 BAIAP2L1Q9UHR4 511 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 CHMP2BQ9UQN3 213 aa9.16□□□□□ -0.94
UBE3B-208ENST00000538070 ADGRA2Q96PE1 1338 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 COL11A1P12107 1806 aaPredicted RBP9.15□□□□□ -0.94
UBE3B-208ENST00000538070 ZBTB42B2RXF5 422 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 E5RJQ4 531 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 H3BRB1 525 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 DNM1LO00429 736 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 CNMDO75829 334 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 LCP1P13796 627 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 MIPP30301 263 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 CTCFP49711 727 aaPredicted RBP9.15□□□□□ -0.94
UBE3B-208ENST00000538070 EIF3EP60228 445 aaKnown RBP9.15□□□□□ -0.94
UBE3B-208ENST00000538070 YWHAEP62258 255 aaKnown RBP9.15□□□□□ -0.94
UBE3B-208ENST00000538070 GPR162Q16538 588 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 CYP1B1Q16678 543 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 TFDP3Q5H9I0 405 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 ANKRD22Q5VYY1 191 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 HIBCHQ6NVY1 386 aaPredicted RBP9.15□□□□□ -0.94
UBE3B-208ENST00000538070 ARMC9Q7Z3E5 817 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 KATNAL2Q8IYT4 538 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 RNF169Q8NCN4 708 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 SPATA18Q8TC71 538 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 FAM149B1Q96BN6 582 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 CFAP36Q96G28 342 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 CFAP57Q96MR6 1250 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 MAGEB5Q9BZ81 275 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 OSBPL7Q9BZF2 842 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 TUT1Q9H6E5 874 aaKnown RBP9.15□□□□□ -0.94
UBE3B-208ENST00000538070 CACNG4Q9UBN1 327 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 SIX4Q9UIU6 781 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 STYXL1Q9Y6J8 313 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 AVILO75366 819 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 SLC25A27O95847 323 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 RBP3P10745 1247 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 MAN1A1P33908 653 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 EPHX2P34913 555 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 PTP4A2Q12974 167 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 DNAJC3Q13217 504 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 MPP2Q14168 576 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 CNGA2Q16280 664 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 PKN2Q16513 984 aaKnown RBP9.15□□□□□ -0.94
UBE3B-208ENST00000538070 SH3D19Q5HYK7 790 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 UNC45BQ8IWX7 931 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 NDRG1Q92597 394 aaKnown RBP9.15□□□□□ -0.94
UBE3B-208ENST00000538070 C18orf25Q96B23 403 aaPredicted RBP9.15□□□□□ -0.94
UBE3B-208ENST00000538070 PGM2Q96G03 612 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 ACAP3Q96P50 834 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 ABCF3Q9NUQ8 709 aa9.15□□□□□ -0.94
UBE3B-208ENST00000538070 TPX2Q9ULW0 747 aaKnown RBP9.15□□□□□ -0.94
UBE3B-208ENST00000538070 SSC5DA1L4H1 1573 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 MCM3APO60318 1980 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 BRCA2P51587 3418 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 CCL15-CCL14A0A0B4J2E2 113 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 A0A0G2JLL6 359 aaPredicted RBP9.15□□□□□ -0.95
UBE3B-208ENST00000538070 PDHXO00330 501 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 LRCH4O75427 683 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 IVDP26440 423 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 GBP2P32456 591 aaPredicted RBP9.15□□□□□ -0.95
UBE3B-208ENST00000538070 RAD23BP54727 409 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 MBTD1Q05BQ5 628 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 MCL1Q07820 350 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 MYO1EQ12965 1108 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 CCL15Q16663 113 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 PPP1R21Q6ZMI0 780 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 PRRT2Q7Z6L0 340 aaPredicted RBP9.15□□□□□ -0.95
UBE3B-208ENST00000538070 RXFP2Q8WXD0 754 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 NSRP1Q9H0G5 558 aaKnown RBP9.15□□□□□ -0.95
UBE3B-208ENST00000538070 ADAM7Q9H2U9 754 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 GOLGA2P5Q9HBQ8 144 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 DPP3Q9NY33 737 aa9.15□□□□□ -0.95
UBE3B-208ENST00000538070 ATAD5Q96QE3 1844 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 IGKV6D-21A0A0A0MT36 114 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 MED7O43513 233 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 PRPSAP2O60256 369 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 ABCD1P33897 745 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 MMP13P45452 471 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 ATXN1P54253 815 aaKnown RBP9.14□□□□□ -0.95
UBE3B-208ENST00000538070 GOLGA7BQ2TAP0 167 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 NOL9Q5SY16 702 aaKnown RBP9.14□□□□□ -0.95
UBE3B-208ENST00000538070 HHATQ5VTY9 493 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 GPRC5AQ8NFJ5 357 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 TMEM176AQ96HP8 235 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 CEP41Q9BYV8 373 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 XYLT2Q9H1B5 865 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 CD248Q9HCU0 757 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 TSPAN16Q9UKR8 245 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 hCG_1818297A0A087WSY0 165 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 A0A1W2PPM1 405 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 TCRBV7S3A2A0A539 114 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 HNRNPH1P31943 449 aaKnown RBP9.14□□□□□ -0.95
UBE3B-208ENST00000538070 IRX4P78413 519 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 PIGHQ14442 188 aaPredicted RBP9.14□□□□□ -0.95
UBE3B-208ENST00000538070 HIF1AQ16665 826 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 CCDC142Q17RM4 750 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 SLC10A6Q3KNW5 377 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms