RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 PEX3P56589 373 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 RTP1P59025 263 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 MRPS9P82933 396 aaKnown RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 GCNT1Q02742 428 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 LMNB2Q03252 620 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 KRT17Q04695 432 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 CYP24A1Q07973 514 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 SFSWAPQ12872 951 aaKnown RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 CALCOCO2Q13137 446 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 KLF1Q13351 362 aaPredicted RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 CCINQ13939 588 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 ZNF268Q14587 947 aaPredicted RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 SNRNP35Q16560 246 aaKnown RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 UGCGQ16739 394 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 AOC3Q16853 763 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 CCDC142Q17RM4 750 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 XRRA1Q6P2D8 792 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 SLC39A4Q6P5W5 647 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 CRELD2Q6UXH1 353 aaPredicted RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 TRIM72Q6ZMU5 477 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 MAEAQ7L5Y9 396 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 TRPM8Q7Z2W7 1104 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 FAM83AQ86UY5 434 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 CBWD2Q8IUF1 395 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 EXOC8Q8IYI6 725 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 MCOLN2Q8IZK6 566 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 PPM1KQ8N3J5 372 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 C1orf127Q8N9H9 656 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 CCDC63Q8NA47 563 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 BBOF1Q8ND07 529 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 FBXL13Q8NEE6 735 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 SYTL5Q8TDW5 730 aaPredicted RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 TAS1R2Q8TE23 839 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 GRK7Q8WTQ7 553 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 ARHGEF2Q92974 986 aaKnown RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 PMEPA1Q969W9 287 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 TRIM11Q96F44 468 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 SNF8Q96H20 258 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 FAM210AQ96ND0 272 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 PRMT1Q99873 361 aaKnown RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 ELAC2Q9BQ52 826 aaKnown RBP6.08□□□□□ -1.44
VPS33A-203ENST00000536212 OSBPL2Q9H1P3 480 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 PDLIM7Q9NR12 457 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 CHST7Q9NS84 486 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 FBXO28Q9NVF7 368 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 RAB20Q9NX57 234 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 EURLQ9NYK6 297 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 SAMD15Q9P1V8 674 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 PRKAG3Q9UGI9 489 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 CCPG1Q9ULG6 757 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 SH3BP1Q9Y3L3 701 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 CEP83Q9Y592 693 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 ACTL7BQ9Y614 415 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 AK5Q9Y6K8 562 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 SLX4Q8IY92 1834 aa6.08□□□□□ -1.44
VPS33A-203ENST00000536212 LOXHD1Q8IVV2 1947 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 NFASCO94856 1347 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 MROH7Q68CQ1 1323 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 MYPNQ86TC9 1320 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 TMEM120BA0PK00 339 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 GOLGA8IPA6NC78 632 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 GOLGA8JA6NMD2 632 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 WDR64B1ANS9 1081 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 TCP10L2B9ZVM9 353 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 H0YIN7 160 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 NFIBO00712 420 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 GIPC1O14908 333 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 EREGO14944 169 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 WDR46O15213 610 aaKnown RBP6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CLDN3O15551 220 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 PSTPIP1O43586 416 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 STK10O94804 968 aaKnown RBP6.07□□□□□ -1.44
VPS33A-203ENST00000536212 PROSCO94903 275 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 GJB6O95452 261 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 GAS8O95995 478 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CCNE2O96020 404 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 VIMP08670 466 aaKnown RBP6.07□□□□□ -1.44
VPS33A-203ENST00000536212 ARAFP10398 606 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 SCP2P22307 547 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CES1P23141 567 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CNGA1P29973 690 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 MAPK4P31152 587 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 SLC8A1P32418 973 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 ABCD1P33897 745 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 RDXP35241 583 aaKnown RBP6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CHKAP35790 457 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 NPTX2P47972 431 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 SLC18A1P54219 525 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 BPIFB4P59827 614 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 TNP2Q05952 138 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 BNIP1Q12981 228 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 ACVR2BQ13705 512 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 NEDD9Q14511 834 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 STAT4Q14765 748 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 RASA2Q15283 850 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 PPP1R7Q15435 360 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 CCNG2Q16589 344 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 SGO2Q562F6 1265 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 XKR9Q5GH70 373 aa6.07□□□□□ -1.44
VPS33A-203ENST00000536212 RNF43Q68DV7 783 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms