RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 GDAP2Q9NXN4 497 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 SIX4Q9UIU6 781 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 WASF3Q9UPY6 502 aa10.84□□□□□ -0.67
CLSTN3-203ENST00000534830 A0A1W2PRU2 124 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 SLC38A8A6NNN8 435 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 C4orf47A7E2U8 309 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 HEPACAM2A8MVW5 462 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 TAF4O00268 1085 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 EIF3DO15371 548 aaKnown RBP eCLIP10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 TGFB1I1O43294 461 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 ZIC2O95409 532 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 F13A1P00488 732 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 ZSCAN22P10073 491 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 HAPLN1P10915 354 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 ATF6P18850 670 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 POLR2BP30876 1174 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 HOXA6P31267 233 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 PNPLA4P41247 253 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 RAP1GAPP47736 663 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 SOX9P48436 509 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 MLLT6P55198 1093 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 FCHO2Q0JRZ9 810 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 PLA2G2CQ5R387 149 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 STXBP5Q5T5C0 1151 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 SH3PXD2AQ5TCZ1 1133 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 METTL23Q86XA0 190 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 YAF2Q8IY57 180 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 SYCP3Q8IZU3 236 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 THEM5Q8N1Q8 247 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 GPD1LQ8N335 351 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 PDCL2Q8N4E4 241 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 LRRC52Q8N7C0 313 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 IQUBQ8NA54 791 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 SPATA18Q8TC71 538 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 FAM200AQ8TCP9 573 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 SPPL2BQ8TCT7 592 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 CACTINQ8WUQ7 758 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 LEO1Q8WVC0 666 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 HPS3Q969F9 1004 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 E2F7Q96AV8 911 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 ZNF560Q96MR9 790 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 LRRC3BQ96PB8 259 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 PKMYT1Q99640 499 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 LPIN3Q9BQK8 851 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 EDEM2Q9BV94 578 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 LRRC27Q9C0I9 530 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 PCIF1Q9H4Z3 704 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 PDE11AQ9HCR9 933 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 VPS45Q9NRW7 570 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 TMLHEQ9NVH6 421 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 RBAKQ9NYW8 714 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 ITGA11Q9UKX5 1188 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 PCDHA7Q9UN72 937 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 L1RE1Q9UN81 338 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 AGAP1Q9UPQ3 857 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 PCDHGA5Q9Y5G8 931 aa10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 DSPP15924 2871 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-203ENST00000534830 DMXL2Q8TDJ6 3036 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 GOLGA8IPA6NC78 632 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 GOLGA8JA6NMD2 632 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 GABRDO14764 452 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 FGF19O95750 216 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 ITGB3P05106 788 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 TFAMQ00059 246 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 AMPD3Q01432 767 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 PKP1Q13835 747 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 DGKKQ5KSL6 1271 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 DAB2IPQ5VWQ8 1189 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 ATL3Q6DD88 541 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 C1orf228Q6PIY5 440 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 TMEM150AQ86TG1 271 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 ITIH5Q86UX2 942 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 ARID3BQ8IVW6 561 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 DCP1BQ8IZD4 617 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 CSGALNACT2Q8N6G5 542 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 DHX58Q96C10 678 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 MSANTD3Q96H12 275 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 FAM84AQ96KN4 292 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 ACBD6Q9BR61 282 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 MAGEF1Q9HAY2 307 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 INTS13Q9NVM9 706 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 OBP2AQ9NY56 170 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 NBEAQ8NFP9 2946 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 PTPRJQ12913 1337 aa10.82□□□□□ -0.68
CLSTN3-203ENST00000534830 ATG2BQ96BY7 2078 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 CHADO15335 359 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 POLR2DO15514 142 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 F11P03951 625 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 HMGA1P17096 107 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 GABRR2P28476 465 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 RBP5P82980 135 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 MGAT5BQ3V5L5 792 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 WDR44Q5JSH3 913 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 RESP18Q5W5W9 173 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 KIAA1211LQ6NV74 962 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 TXNDC11Q6PKC3 985 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 STXBP4Q6ZWJ1 553 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 UNC13DQ70J99 1090 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 DPH6Q7L8W6 267 aa10.81□□□□□ -0.68
CLSTN3-203ENST00000534830 OSTM1Q86WC4 334 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms