RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 HPSEQ9Y251 543 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 PCDHGA2Q9Y5H1 932 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 NCANO14594 1321 aa14.35□□□□□ -0.11
CAPN1-228ENST00000534373 FAM237AA0A1B0GTK4 181 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 MYBPHLA2RUH7 354 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 KLRC4O43908 158 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 EXOC3O60645 756 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 ATICP31939 592 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 KPNA1P52294 538 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-228ENST00000534373 CYP4F8P98187 520 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 PPP2R5DQ14738 602 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 DDR2Q16832 855 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 MON1AQ86VX9 555 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 ADSSL1Q8N142 457 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 KBTBD7Q8WVZ9 684 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 NELL1Q92832 810 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 CCDC127Q96BQ5 260 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 FAM84AQ96KN4 292 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 MMS19Q96T76 1030 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 KIF9Q9HAQ2 790 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 LMAN1LQ9HAT1 526 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 EXOC1Q9NV70 894 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 MAGEC2Q9UBF1 373 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-228ENST00000534373 NDRG2Q9UN36 371 aaKnown RBP14.34□□□□□ -0.11
CAPN1-228ENST00000534373 R4GN57 208 aa14.34□□□□□ -0.11
CAPN1-228ENST00000534373 FAM186AA6NE01 2351 aa14.33□□□□□ -0.11
CAPN1-228ENST00000534373 A0A1B0GVL5 298 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 KINO60870 393 aaKnown RBP14.33□□□□□ -0.12
CAPN1-228ENST00000534373 KIF20AO95235 890 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 PRAMEF12O95522 483 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 CHRNB1P11230 501 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 PFKFB1P16118 471 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 CCNE1P24864 410 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 LMO2P25791 158 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 GNL1P36915 607 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-228ENST00000534373 CDR1P51861 262 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 NRLP54845 237 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 CLDN10P78369 228 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 CSTF1Q05048 431 aaKnown RBP14.33□□□□□ -0.12
CAPN1-228ENST00000534373 STK4Q13043 487 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 MTAPQ13126 283 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 TRPC3Q13507 836 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 LRRC32Q14392 662 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 ZNF268Q14587 947 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-228ENST00000534373 WDR72Q3MJ13 1102 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 MAB21L3Q8N8X9 362 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 FSIP1Q8NA03 581 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 ZBTB44Q8NCP5 570 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 MYCBPAPQ8TBZ2 947 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 ATRIPQ8WXE1 791 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 SYAP1Q96A49 352 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-228ENST00000534373 SPATA17Q96L03 361 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 SYT15Q9BQS2 421 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 SCAND2PQ9GZW5 306 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-228ENST00000534373 VRTNQ9H8Y1 702 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 PRMT8Q9NR22 394 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-228ENST00000534373 TDP1Q9NUW8 608 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 DMAC2Q9NW81 257 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 ZSCAN32Q9NX65 697 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 EHD2Q9NZN4 543 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 MAGED2Q9UNF1 606 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-228ENST00000534373 ZDHHC9Q9Y397 364 aa14.33□□□□□ -0.12
CAPN1-228ENST00000534373 NUP210Q8TEM1 1887 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-228ENST00000534373 CFAP54Q96N23 3096 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-228ENST00000534373 SLC38A8A6NNN8 435 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 SPECC1L-ADORA2AF8WAN1 911 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 PDXKO00764 312 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 PFKLP17858 780 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 CTHP32929 405 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 SYKP43405 635 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 GPR15P49685 360 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 CCR3P51677 355 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 TNNC1P63316 161 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 KMT5BQ4FZB7 885 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 DGKKQ5KSL6 1271 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 GPIHBP1Q8IV16 184 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 GRAMD1CQ8IYS0 662 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 SYNPOQ8N3V7 929 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 KIAA0895Q8NCT3 520 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 PARD3BQ8TEW8 1205 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 ZNF516Q92618 1163 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 CCDC47Q96A33 483 aaKnown RBP14.32□□□□□ -0.12
CAPN1-228ENST00000534373 FAM83CQ9BQN1 747 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-228ENST00000534373 SNX25Q9H3E2 840 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 COL4A3Q01955 1670 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 FANCMQ8IYD8 2048 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 COL4A2P08572 1712 aa14.32□□□□□ -0.12
CAPN1-228ENST00000534373 TICRRQ7Z2Z1 1910 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 A0A1W2PQ27 194 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 A0A1W2PQ64 194 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 A0A1W2PQD8 194 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 TRIM66O15016 1216 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 PHACTR2O75167 634 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 ATP2C2O75185 946 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 PDGFRBP09619 1106 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 PPP3CCP48454 512 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 PDE6CP51160 858 aa14.31□□□□□ -0.12
CAPN1-228ENST00000534373 AMPD2Q01433 879 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms