RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 RSPH10BP0C881 870 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 DUX4L2P0CJ85 424 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 DUX4L3P0CJ86 424 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 DUX4L4P0CJ87 422 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 DUX4L5P0CJ88 424 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 DUX4L6P0CJ89 424 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 DUX4L7P0CJ90 424 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 THRAP10827 490 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 PECAM1P16284 738 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-236ENST00000533667 GEMP55040 296 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 NKX1-1Q15270 411 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-236ENST00000533667 FAM81AQ8TBF8 368 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 MYCBPAPQ8TBZ2 947 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 PPP1R14BQ96C90 147 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 PRPF18Q99633 342 aaKnown RBP7.29□□□□□ -1.24
CTNND1-236ENST00000533667 NOD2Q9HC29 1040 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.29□□□□□ -1.242e-7■■□□□ 14.4
CTNND1-236ENST00000533667 DUX4Q9UBX2 424 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 L1RE1Q9UN81 338 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 CARD8Q9Y2G2 431 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 C1orf167Q5SNV9 1468 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 TRIM49D1C9J1S8 452 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 RPS12P25398 132 aaKnown RBP7.29□□□□□ -1.24
CTNND1-236ENST00000533667 CTCFP49711 727 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-236ENST00000533667 RAP1GDS1P52306 607 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 SEC24CP53992 1094 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 TUBA4AP68366 448 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 RUNX1T1Q06455 604 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 GOLGA7BQ2TAP0 167 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 TRIM60Q495X7 471 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 CDKAL1Q5VV42 579 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 TTI2Q6NXR4 508 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 NOTUMQ6P988 496 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 TRIM74Q86UV6 250 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 TRIM73Q86UV7 250 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 BBS7Q8IWZ6 715 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 TERB1Q8NA31 727 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 NR1H4Q96RI1 486 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-236ENST00000533667 COQ7Q99807 217 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 NDEL1Q9GZM8 345 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 THAP2Q9H0W7 228 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 MARCOQ9UEW3 520 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-236ENST00000533667 GGT7Q9UJ14 662 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 UBQLN1Q9UMX0 589 aaKnown RBP7.29□□□□□ -1.24
CTNND1-236ENST00000533667 GMEB1Q9Y692 573 aa7.29□□□□□ -1.24
CTNND1-236ENST00000533667 AFF2P51816 1311 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 FRMPD1Q5SYB0 1578 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 PTPRMP28827 1452 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 EVPLLA8MZ36 301 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 F9P00740 461 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 VIL1P09327 827 aaKnown RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 ITGA4P13612 1032 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 SSTR3P32745 418 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 KLK7P49862 253 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 CCDC15Q0P6D6 951 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 WASHC5Q12768 1159 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 LAMC2Q13753 1193 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 SPDYAQ5MJ70 313 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 AGAP9Q5VTM2 703 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 CENPPQ6IPU0 288 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 PKN3Q6P5Z2 889 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 NLRP9Q7RTR0 991 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 CDR2LQ86X02 465 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 DDX42Q86XP3 938 aaKnown RBP eCLIP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 ZNF669Q96BR6 464 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 HPDLQ96IR7 371 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 METTL5Q9NRN9 209 aaKnown RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 CNOT7Q9UIV1 285 aaKnown RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 PHTF1Q9UMS5 762 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 A0A087X0T9 212 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 SPDYE5A6NIY4 337 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 SUPT3HB4E1H0 165 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 TM9SF1O15321 606 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 MSH4O15457 936 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 EIF2S1P05198 315 aaKnown RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 FAM228BP0C875 321 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 MAPTP10636 758 aaKnown RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 VDRP11473 427 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 NQO1P15559 274 aaKnown RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 TAF6P49848 677 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 SERPINB8P50452 374 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 DSG1Q02413 1049 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 MRPL28Q13084 256 aaKnown RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 SPDYE7PQ495Y7 208 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 TFDP3Q5H9I0 405 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 MEI1Q5TIA1 1274 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 STYK1Q6J9G0 422 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 C11orf63Q6NUN7 778 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 CYB5D1Q6P9G0 228 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 LRRC34Q8IZ02 419 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 EXD1Q8NHP7 514 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 SLC7A14Q8TBB6 771 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 FAM162AQ96A26 154 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 CCT7Q99832 543 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 ASCC2Q9H1I8 757 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 PAPOLBQ9NRJ5 636 aaKnown RBP7.28□□□□□ -1.24
CTNND1-236ENST00000533667 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.28□□□□□ -1.243e-7■■□□□ 14.4
CTNND1-236ENST00000533667 SMARCAL1Q9NZC9 954 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 CD274Q9NZQ7 290 aa7.28□□□□□ -1.24
CTNND1-236ENST00000533667 SELENONQ9NZV5 590 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms