RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.55■□□□□ 0.56
NXF1-216ENST00000533499 F8VZ95 297 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 THAP12O43422 761 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 C8AP07357 584 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 ATF2P15336 505 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 GRIK1P39086 918 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 PBX1P40424 430 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 SMARCB1Q12824 385 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 GOLGA7BQ2TAP0 167 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 PPM1LQ5SGD2 360 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 SPECC1LQ69YQ0 1117 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 LILRA6Q6PI73 481 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 CCDC149Q6ZUS6 474 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 VSTM4Q8IW00 320 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 C12orf76Q8N812 135 aaPredicted RBP18.54■□□□□ 0.56
NXF1-216ENST00000533499 VN1R2Q8NFZ6 395 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 SPPL2BQ8TCT7 592 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 PKMYT1Q99640 499 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 PDCL3Q9H2J4 239 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 KRT82Q9NSB4 513 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 DPP7Q9UHL4 492 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 DAAM1Q9Y4D1 1078 aa18.54■□□□□ 0.56
NXF1-216ENST00000533499 FSD2A1L4K1 749 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 VNN2O95498 520 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 ADCY5O95622 1261 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 LRG1P02750 347 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 PAEPP09466 180 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 TPM1P09493 284 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 VDRP11473 427 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 GNA15P30679 374 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 SOX5P35711 763 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 ALDH1A3P47895 512 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 PTK2Q05397 1052 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 CLUL1Q15846 466 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 PPP1R26Q5T8A7 1209 aaPredicted RBP18.53■□□□□ 0.56
NXF1-216ENST00000533499 SDHAF4Q5VUM1 108 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 FAM35AQ86V20 835 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 ZNF397Q8NF99 534 aaPredicted RBP18.53■□□□□ 0.56
NXF1-216ENST00000533499 C2orf15Q8WU43 125 aaKnown RBP18.53■□□□□ 0.56
NXF1-216ENST00000533499 GPR88Q9GZN0 384 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 CRISPLD1Q9H336 500 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 PLEKHA4Q9H4M7 779 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 GRPEL1Q9HAV7 217 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 HESX1Q9UBX0 185 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 INSL5Q9Y5Q6 135 aa18.53■□□□□ 0.56
NXF1-216ENST00000533499 CCL16O15467 120 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 NCK2O43639 380 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 RFPL2O75678 378 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 AP1G2O75843 785 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 ANXA13P27216 316 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 TUFMP49411 452 aaKnown RBP18.52■□□□□ 0.56
NXF1-216ENST00000533499 GPR15P49685 360 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 ZNF132P52740 706 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 BPIFB4P59827 614 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 TWF1Q12792 350 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 ADAM15Q13444 863 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 TAF12Q16514 161 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 DDR2Q16832 855 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 RARS2Q5T160 578 aaKnown RBP18.52■□□□□ 0.56
NXF1-216ENST00000533499 TAF3Q5VWG9 929 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 SLC47A2Q86VL8 602 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 TCEAL8Q8IYN2 117 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 FAM71AQ8IYT1 594 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 FUKQ8N0W3 1084 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 GPR152Q8TDT2 470 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 GIPC2Q8TF65 315 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 TFAP2BQ92481 460 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 PIDD1Q9HB75 910 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 DZANK1Q9NVP4 752 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 KIAA1257Q9ULG3 409 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 YIPF1Q9Y548 306 aa18.52■□□□□ 0.56
NXF1-216ENST00000533499 MTCL1Q9Y4B5 1905 aaKnown RBP18.52■□□□□ 0.56
NXF1-216ENST00000533499 ITIH6Q6UXX5 1313 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 LRRC53A6NM62 1247 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 M0QYV0 167 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 GLP2RO95838 553 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 FAM200BP0CF97 657 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 HAPLN1P10915 354 aaPredicted RBP18.51■□□□□ 0.55
NXF1-216ENST00000533499 CASP14P31944 242 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 CLCN1P35523 988 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 JAM2P57087 298 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 IFRD2Q12894 506 aaPredicted RBP18.51■□□□□ 0.55
NXF1-216ENST00000533499 ASIC2Q16515 512 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 SFMBT2Q5VUG0 894 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 TMC5Q6UXY8 1006 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 MAFAQ8NHW3 353 aaPredicted RBP18.51■□□□□ 0.55
NXF1-216ENST00000533499 UBA3Q8TBC4 463 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 SMARCD1Q96GM5 515 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 MRFAP1L1Q96HT8 127 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 FUBP3Q96I24 572 aaKnown RBP eCLIP18.51■□□□□ 0.55
NXF1-216ENST00000533499 HNRNPABQ99729 332 aaKnown RBP18.51■□□□□ 0.55
NXF1-216ENST00000533499 TSPAN16Q9UKR8 245 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 CNTN6Q9UQ52 1028 aa18.51■□□□□ 0.55
NXF1-216ENST00000533499 LUC7L2Q9Y383 392 aaKnown RBP18.51■□□□□ 0.55
NXF1-216ENST00000533499 FAM170AA1A519 330 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 MED7O43513 233 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 ZMYND10O75800 440 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 PDE6CP51160 858 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 EPHB3P54753 998 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 MAP3K7CLP57077 242 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms