RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 CC2D1AQ6P1N0 951 aaPredicted RBP19.1■□□□□ 0.65
PCF11-206ENST00000533018 SHC4Q6S5L8 630 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 PRR23BQ6ZRT6 265 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 Q6ZS52 159 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 TMEM150AQ86TG1 271 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 HSCBQ8IWL3 235 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 MMS19Q96T76 1030 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 KIAA1586Q9HCI6 787 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 TRPC7Q9HCX4 862 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 ABCB6Q9NP58 842 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 UXTQ9UBK9 157 aaPredicted RBP19.1■□□□□ 0.65
PCF11-206ENST00000533018 GMEB2Q9UKD1 530 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 CCL26Q9Y258 94 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 EIF3DO15371 548 aaKnown RBP eCLIP19.09■□□□□ 0.65
PCF11-206ENST00000533018 POLR2DO15514 142 aaKnown RBP19.09■□□□□ 0.65
PCF11-206ENST00000533018 DLATP10515 647 aaKnown RBP19.09■□□□□ 0.65
PCF11-206ENST00000533018 TDGF1P13385 188 aa19.09■□□□□ 0.65
PCF11-206ENST00000533018 TNNI1P19237 187 aa19.09■□□□□ 0.65
PCF11-206ENST00000533018 CCDC142Q17RM4 750 aa19.09■□□□□ 0.65
PCF11-206ENST00000533018 FAM26FQ5R3K3 315 aa19.09■□□□□ 0.65
PCF11-206ENST00000533018 TRIM68Q6AZZ1 485 aa19.09■□□□□ 0.65
PCF11-206ENST00000533018 DGLUCYQ7Z3D6 616 aa19.09■□□□□ 0.65
PCF11-206ENST00000533018 NELFCDQ8IXH7 590 aa19.09■□□□□ 0.65
PCF11-206ENST00000533018 SPATA18Q8TC71 538 aa19.09■□□□□ 0.65
PCF11-206ENST00000533018 ZNF507Q8TCN5 953 aa19.09■□□□□ 0.65
PCF11-206ENST00000533018 USP13Q92995 863 aaPredicted RBP19.09■□□□□ 0.65
PCF11-206ENST00000533018 FNBP1Q96RU3 617 aa19.09■□□□□ 0.65
PCF11-206ENST00000533018 EBF3Q9H4W6 596 aa19.09■□□□□ 0.65
PCF11-206ENST00000533018 CLIC2O15247 247 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 PDGFRBP09619 1106 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 HOXD13P35453 343 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 ME1P48163 572 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 CYP2J2P51589 502 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 PSMC1P62191 440 aaKnown RBP19.08■□□□□ 0.64
PCF11-206ENST00000533018 RUNX3Q13761 415 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 SNRNP35Q16560 246 aaKnown RBP19.08■□□□□ 0.64
PCF11-206ENST00000533018 HEATR6Q6AI08 1181 aaKnown RBP19.08■□□□□ 0.64
PCF11-206ENST00000533018 C4orf50Q6ZRC1 276 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 DPH6Q7L8W6 267 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 MON1AQ86VX9 555 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 WDR49Q8IV35 697 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 GPR161Q8N6U8 529 aaKnown RBP19.08■□□□□ 0.64
PCF11-206ENST00000533018 CCDC127Q96BQ5 260 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 PKMYT1Q99640 499 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 C7orf25Q9BPX7 421 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 SYT15Q9BQS2 421 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 BLZF1Q9H2G9 400 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 KIF9Q9HAQ2 790 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 AGPAT3Q9NRZ7 376 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 FAM13BQ9NYF5 915 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 MAGEC2Q9UBF1 373 aaPredicted RBP19.08■□□□□ 0.64
PCF11-206ENST00000533018 USP18Q9UMW8 372 aa19.08■□□□□ 0.64
PCF11-206ENST00000533018 CACNA1AO00555 2505 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 CHURC1-FNTBB4DL54 471 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 GABRDO14764 452 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 ATP2C2O75185 946 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 NOL4O94818 638 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 ZSCAN22P10073 491 aaPredicted RBP19.07■□□□□ 0.64
PCF11-206ENST00000533018 LMO2P25791 158 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 CASP1P29466 404 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 FNTBP49356 437 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 CYP27A1Q02318 531 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 PUM1Q14671 1186 aaKnown RBP eCLIP19.07■□□□□ 0.64
PCF11-206ENST00000533018 RSPO4Q2I0M5 234 aaPredicted RBP19.07■□□□□ 0.64
PCF11-206ENST00000533018 CFAP221Q4G0U5 840 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 EPM2AIP1Q7L775 607 aaPredicted RBP19.07■□□□□ 0.64
PCF11-206ENST00000533018 FSIP1Q8NA03 581 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 SPRYD3Q8NCJ5 442 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 SNX21Q969T3 373 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 FUBP3Q96I24 572 aaKnown RBP eCLIP19.07■□□□□ 0.64
PCF11-206ENST00000533018 FAM83CQ9BQN1 747 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 MAGEF1Q9HAY2 307 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 CDH9Q9ULB4 789 aa19.07■□□□□ 0.64
PCF11-206ENST00000533018 SOBPA7XYQ1 873 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 CLSTN1O94985 981 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 F13A1P00488 732 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 CKMP06732 381 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 GRIK1P39086 918 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 AFMP43652 599 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 AMPD2Q01433 879 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 DMWDQ09019 674 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 GRSF1Q12849 480 aaKnown RBP eCLIP19.06■□□□□ 0.64
PCF11-206ENST00000533018 CCINQ13939 588 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 SIM2Q14190 667 aaPredicted RBP19.06■□□□□ 0.64
PCF11-206ENST00000533018 MAPRE1Q15691 268 aaKnown RBP19.06■□□□□ 0.64
PCF11-206ENST00000533018 WDR44Q5JSH3 913 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 FAM171BQ6P995 826 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 UNC13DQ70J99 1090 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 HS2ST1Q7LGA3 356 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 TRAPPC11Q7Z392 1133 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 SYNPOQ8N3V7 929 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 XXYLT1Q8NBI6 393 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 KBTBD7Q8WVZ9 684 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 TRMT2BQ96GJ1 504 aaKnown RBP19.06■□□□□ 0.64
PCF11-206ENST00000533018 CYP2S1Q96SQ9 504 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 SNX25Q9H3E2 840 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 SLC39A2Q9NP94 309 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 HPS4Q9NQG7 708 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 RALGAPA1Q6GYQ0 2036 aa19.06■□□□□ 0.64
PCF11-206ENST00000533018 ANAPC1Q9H1A4 1944 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms