RNA–Protein interactions for RNA: ENST00000532044.1

AP003040.1-201, humanhuman

BASIC

Gene AP003040.1, Length 1,024 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003040.1-201ENST00000532044 DDX43Q9NXZ2 648 aaKnown RBP13.68□□□□□ -0.22
AP003040.1-201ENST00000532044 NCDNQ9UBB6 729 aa13.68□□□□□ -0.22
AP003040.1-201ENST00000532044 GTF3C4Q9UKN8 822 aa13.68□□□□□ -0.22
AP003040.1-201ENST00000532044 HELZP42694 1942 aaKnown RBP13.68□□□□□ -0.22
AP003040.1-201ENST00000532044 SPAG17Q6Q759 2223 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 CHD6Q8TD26 2715 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 DPYSL4O14531 572 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 TRDMT1O14717 391 aaKnown RBP13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 EIF3DO15371 548 aaKnown RBP eCLIP13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 HUS1O60921 280 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 TCF3P15923 654 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 RBP5P82980 135 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 BFSP1Q12934 665 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 ZNF77Q15935 545 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 DDR2Q16832 855 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 LMBRD2Q68DH5 695 aaPredicted RBP13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 FSTL4Q6MZW2 842 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 DPH6Q7L8W6 267 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 DGLUCYQ7Z3D6 616 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 CCDC65Q8IXS2 484 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 CSGALNACT2Q8N6G5 542 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 PDILTQ8N807 584 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 MAB21L3Q8N8X9 362 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 ZNF507Q8TCN5 953 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 CACTINQ8WUQ7 758 aaKnown RBP13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 EZH1Q92800 747 aaPredicted RBP13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 SLC22A12Q96S37 553 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 HINFPQ9BQA5 517 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 CUEDC2Q9H467 287 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 CRTAC1Q9NQ79 661 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 GKN1Q9NS71 199 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 TDP1Q9NUW8 608 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 GCNT4Q9P109 453 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 SNX9Q9Y5X1 595 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 MYO16Q9Y6X6 1858 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 EML5Q05BV3 1969 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 CACNA1BQ00975 2339 aa13.67□□□□□ -0.22
AP003040.1-201ENST00000532044 MAP1BP46821 2468 aaKnown RBP13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 CHURC1-FNTBB4DL54 471 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 SPTLC2O15270 562 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 LRP3O75074 770 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 PRPF40AO75400 957 aaKnown RBP13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 YEATS4O95619 227 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 CHRM1P11229 460 aaPredicted RBP13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 ARSAP15289 507 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 LHX1P48742 406 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 FNTBP49356 437 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 RPL10AP62906 217 aaKnown RBP13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 MYL7Q01449 175 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 SRSF5Q13243 272 aaKnown RBP13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 RUNX3Q13761 415 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 PPP2R5DQ14738 602 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 BMT2Q1RMZ1 405 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 NAIF1Q69YI7 327 aaPredicted RBP13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 TRIM68Q6AZZ1 485 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 WDR5BQ86VZ2 330 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 LONP2Q86WA8 852 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 SYCP3Q8IZU3 236 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 GCNAQ96QF7 691 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 FBRSL1Q9HCM7 1045 aaKnown RBP13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 AGPAT3Q9NRZ7 376 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 HSPBP1Q9NZL4 362 aa13.66□□□□□ -0.22
AP003040.1-201ENST00000532044 ZNF638Q14966 1978 aaKnown RBP13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 ATP2C2O75185 946 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 RETP07949 1114 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 TMEM191BP0C7N4 346 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 WARSP23381 471 aaKnown RBP13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 LMO2P25791 158 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 PCSK1P29120 753 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 CNR2P34972 360 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 AVPR1AP37288 418 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 ZXDBP98169 803 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 LMNB2Q03252 620 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 WDR49Q8IV35 697 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 SCFD1Q8WVM8 642 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 SNX21Q969T3 373 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 SPATA17Q96L03 361 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 CEP295NLQ96MC4 621 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 C7orf25Q9BPX7 421 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 SYT15Q9BQS2 421 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 TTLL2Q9BWV7 592 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 EBF3Q9H4W6 596 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 TMEM30AQ9NV96 361 aa13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 THG1LQ9NWX6 298 aaKnown RBP13.65□□□□□ -0.22
AP003040.1-201ENST00000532044 UBE4BO95155 1302 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 SDK1Q7Z5N4 2213 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 FRYQ5TBA9 3013 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 ZNF233A6NK53 670 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 PRR5-ARHGAP8B1AHC4 643 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 CUTAO60888 179 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 ATXN1P54253 815 aaKnown RBP13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 USP46P62068 366 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 ARHGAP8P85298 464 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 MTF1Q14872 753 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 PSMD6Q15008 389 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 STK38Q15208 465 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 LPAL2Q16609 132 aa13.64□□□□□ -0.23
AP003040.1-201ENST00000532044 GAB4Q2WGN9 574 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms