RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ARSHQ5FYA8 562 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 EFCAB13Q8IY85 973 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 TMEFF1Q8IYR6 380 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 DEFB119Q8N690 84 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 KDF1Q8NAX2 398 aaPredicted RBP9.95□□□□□ -0.82
NEDD8-206ENST00000531430 RIN3Q8TB24 985 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 SH3RF2Q8TEC5 729 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 OSCP1Q8WVF1 389 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 RLN3Q8WXF3 142 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 ATP2A3Q93084 1043 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 TSPAN18Q96SJ8 248 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 LLPHQ9BRT6 129 aaKnown RBP9.95□□□□□ -0.82
NEDD8-206ENST00000531430 SLC32A1Q9H598 525 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 BCCIPQ9P287 314 aaKnown RBP eCLIP9.95□□□□□ -0.82
NEDD8-206ENST00000531430 CPSF3Q9UKF6 684 aaKnown RBP9.95□□□□□ -0.82
NEDD8-206ENST00000531430 GTF3C4Q9UKN8 822 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 LHX6Q9UPM6 363 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 THADAQ6YHU6 1953 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 SPAARA0A1B0GVQ0 90 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 ANO9A1A5B4 782 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 ANTXRLA6NF34 631 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 SRRM3A6NNA2 597 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 TISP43B9A030 160 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 CDX4O14627 284 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 HYAL3O43820 417 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 HUS1O60921 280 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 ALDH1A2O94788 518 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 KRT19P08727 400 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 RDXP35241 583 aaKnown RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 PRPHP41219 470 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 UBA7P41226 1012 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 TFAMQ00059 246 aaKnown RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 FAM160A1Q05DH4 1040 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 NFE2Q16621 373 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 ZC2HC1CQ53FD0 456 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 TRIM61Q5EBN2 209 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 C11orf74Q86VG3 221 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 SPATA2LQ8IUW3 424 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 FSIP1Q8NA03 581 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 SPRYD3Q8NCJ5 442 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 CCDC26Q8TAB7 109 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 ZCCHC14Q8WYQ9 949 aaKnown RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 POMGNT1Q8WZA1 660 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 EZH1Q92800 747 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 CALML4Q96GE6 196 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 SLC22A12Q96S37 553 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 REEP2Q9BRK0 252 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 GTPBP2Q9BX10 602 aaKnown RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 NUSAP1Q9BXS6 441 aaKnown RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 ASB7Q9H672 318 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 PARVGQ9HBI0 331 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 DDX43Q9NXZ2 648 aaKnown RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 UXTQ9UBK9 157 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 EBF1Q9UH73 591 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 AGO2Q9UKV8 859 aaKnown RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 AGAP1Q9UPQ3 857 aa9.94□□□□□ -0.82
NEDD8-206ENST00000531430 R3HCC1Q9Y3T6 440 aaKnown RBP9.94□□□□□ -0.82
NEDD8-206ENST00000531430 ANK1P16157 1881 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 NUP210Q8TEM1 1887 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-206ENST00000531430 IGF2RP11717 2491 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 C2orf78A6NCI8 922 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 MYMKA6NI61 221 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 SCAMP3O14828 347 aaKnown RBP9.93□□□□□ -0.82
NEDD8-206ENST00000531430 TBCAO75347 108 aaKnown RBP9.93□□□□□ -0.82
NEDD8-206ENST00000531430 CFIP05156 583 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 CSRP1P21291 193 aaKnown RBP9.93□□□□□ -0.82
NEDD8-206ENST00000531430 TIE1P35590 1138 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 SLC6A11P48066 632 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 SIM1P81133 766 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-206ENST00000531430 MYL7Q01449 175 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 RING1Q06587 406 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 MCM6Q14566 821 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 ZNF268Q14587 947 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-206ENST00000531430 KCNB1Q14721 858 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 ACAP1Q15027 740 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 EML3Q32P44 896 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 PMS2CLQ68D20 193 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 SLFN12LQ6IEE8 588 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 SLC39A4Q6P5W5 647 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 LRSAM1Q6UWE0 723 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 LPCAT2Q7L5N7 544 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 HDDC3Q8N4P3 179 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 CSGALNACT2Q8N6G5 542 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 FRMD1Q8N878 549 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 LRRC15Q8TF66 581 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 ZSCAN31Q96LW9 406 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-206ENST00000531430 IKZF4Q9H2S9 585 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 ZDHHC4Q9NPG8 344 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 FSCN3Q9NQT6 498 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 KCND2Q9NZV8 630 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 ODF2LQ9ULJ1 636 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 DERAQ9Y315 318 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 SCN1AP35498 2009 aa9.93□□□□□ -0.82
NEDD8-206ENST00000531430 EML5Q05BV3 1969 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 ZFYVE26Q68DK2 2539 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 K7EQS6 105 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 FAM189A1O60320 539 aa9.92□□□□□ -0.82
NEDD8-206ENST00000531430 KLF8O95600 359 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-206ENST00000531430 NFATC1O95644 943 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms