RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ATF6P18850 670 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 ITPKAP23677 461 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 AVPR1AP37288 418 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 SEC13P55735 322 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 YWHAHQ04917 246 aaPredicted RBP8.96□□□□□ -0.98
CD44-232ENST00000531118 GFPT1Q06210 699 aaPredicted RBP8.96□□□□□ -0.98
CD44-232ENST00000531118 BFSP1Q12934 665 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 USP4Q13107 963 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 GPR17Q13304 367 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 PDGFRLQ15198 375 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 NR6A1Q15406 480 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 DUOXA1Q1HG43 343 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 CENPPQ6IPU0 288 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 DNAJB7Q7Z6W7 309 aaPredicted RBP8.96□□□□□ -0.98
CD44-232ENST00000531118 NEK8Q86SG6 692 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 TTC30AQ86WT1 665 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 NAXDQ8IW45 347 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 CMTM8Q8IZV2 173 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 ZNF843Q8N446 348 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 DEPTORQ8TB45 409 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 PIP4K2CQ8TBX8 421 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 WHAMMQ8TF30 809 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 BRF1Q92994 677 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 USP13Q92995 863 aaPredicted RBP8.96□□□□□ -0.98
CD44-232ENST00000531118 C18orf25Q96B23 403 aaPredicted RBP8.96□□□□□ -0.98
CD44-232ENST00000531118 KIFC3Q9BVG8 833 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 CCDC94Q9BW85 323 aaPredicted RBP8.96□□□□□ -0.98
CD44-232ENST00000531118 SLC46A2Q9BY10 475 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 CDT1Q9H211 546 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 PRM3Q9NNZ6 103 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 DNAAF2Q9NVR5 837 aaKnown RBP8.96□□□□□ -0.98
CD44-232ENST00000531118 CNTN3Q9P232 1028 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 KNTC1P50748 2209 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 CABIN1Q9Y6J0 2220 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 OR6C75A6NL08 312 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 J3QKU1 62 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 M0QZQ0 153 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 CCNT1O60563 726 aaKnown RBP8.95□□□□□ -0.98
CD44-232ENST00000531118 GJB3O75712 270 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 LARGE1O95461 756 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 SERPINF2P08697 491 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 CPA1P15085 419 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 KCNE1P15382 129 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 RPL9P32969 192 aaKnown RBP8.95□□□□□ -0.98
CD44-232ENST00000531118 NAMPTP43490 491 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 OSTNP61366 133 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 MTF1Q14872 753 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 VEPH1Q14D04 833 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 CRY1Q16526 586 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 ZNF568Q3ZCX4 644 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 SPDYCQ5MJ68 293 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 NT5DC1Q5TFE4 455 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 ALKAL1Q6UXT8 129 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 TOGARAM2Q6ZUX3 1019 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 APBB1IPQ7Z5R6 666 aaPredicted RBP8.95□□□□□ -0.98
CD44-232ENST00000531118 RABEPKQ7Z6M1 372 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 FRMD1Q8N878 549 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 ATAD1Q8NBU5 361 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 CCDC26Q8TAB7 109 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 CEP76Q8TAP6 659 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 PIGOQ8TEQ8 1089 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 SEPT5Q99719 369 aaPredicted RBP8.95□□□□□ -0.98
CD44-232ENST00000531118 HSD17B14Q9BPX1 270 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 OXCT2Q9BYC2 517 aaPredicted RBP8.95□□□□□ -0.98
CD44-232ENST00000531118 ECT2Q9H8V3 914 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 TUBGCP4Q9UGJ1 667 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 FKBPLQ9UIM3 349 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 ZMYM5Q9UJ78 669 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 APOBEC2Q9Y235 224 aaKnown RBP8.95□□□□□ -0.98
CD44-232ENST00000531118 PCDHB9Q9Y5E1 797 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 TIMM13Q9Y5L4 95 aaPredicted RBP8.95□□□□□ -0.98
CD44-232ENST00000531118 MYOFQ9NZM1 2061 aa8.95□□□□□ -0.98
CD44-232ENST00000531118 MYH11P35749 1972 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 TP53BP1Q12888 1972 aaPredicted RBP8.94□□□□□ -0.98
CD44-232ENST00000531118 SCN1AP35498 2009 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 ANTXRLA6NF34 631 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 ALDH1A2O94788 518 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 OAZ2O95190 189 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 DDX6P26196 483 aaKnown RBP eCLIP8.94□□□□□ -0.98
CD44-232ENST00000531118 IFNAR2P48551 515 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 CYP4F3Q08477 520 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 MYBPC2Q14324 1141 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 ZNF77Q15935 545 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 MAP7D1Q3KQU3 841 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 C2orf27AQ580R0 203 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 CC2D1AQ6P1N0 951 aaPredicted RBP8.94□□□□□ -0.98
CD44-232ENST00000531118 Q6ZUG5 572 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 TMPRSS7Q7RTY8 843 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 SLFN12Q8IYM2 578 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 TMEM130Q8N3G9 435 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 CCDC33Q8N5R6 958 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 ATP2A3Q93084 1043 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 AIFM3Q96NN9 605 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 NCOA5Q9HCD5 579 aaKnown RBP8.94□□□□□ -0.98
CD44-232ENST00000531118 POLMQ9NP87 494 aaPredicted RBP8.94□□□□□ -0.98
CD44-232ENST00000531118 TNFSF13BQ9Y275 285 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 WNT6Q9Y6F9 365 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 PHLPP2Q6ZVD8 1323 aa8.94□□□□□ -0.98
CD44-232ENST00000531118 DOPEY2Q9Y3R5 2298 aa8.93□□□□□ -0.98
CD44-232ENST00000531118 A0A087WWV3 80 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms