RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 LUZP1Q86V48 1076 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.29■□□□□ 0.2
CCS-206ENST00000530961 RIPOR3Q96MK2 946 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 NECTIN4Q96NY8 510 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 VPS16Q9H269 839 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 CRTAC1Q9NQ79 661 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 TMLHEQ9NVH6 421 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 ABI2Q9NYB9 513 aaPredicted RBP16.29■□□□□ 0.2
CCS-206ENST00000530961 INSL5Q9Y5Q6 135 aa16.29■□□□□ 0.2
CCS-206ENST00000530961 COL4A4P53420 1690 aaPredicted RBP16.29■□□□□ 0.2
CCS-206ENST00000530961 C5orf42Q9H799 3197 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 HAPLN1P10915 354 aaPredicted RBP16.28■□□□□ 0.2
CCS-206ENST00000530961 SLC9A1P19634 815 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 MTHFRP42898 656 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 CLUL1Q15846 466 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 MGAT5BQ3V5L5 792 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 MDH1BQ5I0G3 518 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 PHLDB3Q6NSJ2 640 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 HFE2Q6ZVN8 426 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 ELMOD1Q8N336 334 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 WHAMMQ8TF30 809 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 SUSD6Q92537 303 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 ZNF707Q96C28 371 aaPredicted RBP16.28■□□□□ 0.2
CCS-206ENST00000530961 PCED1BQ96HM7 432 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 ARID3AQ99856 593 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 DPEP3Q9H4B8 488 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 PIDD1Q9HB75 910 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 UBE2TQ9NPD8 197 aaPredicted RBP16.28■□□□□ 0.2
CCS-206ENST00000530961 APEX2Q9UBZ4 518 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 SLC27A5Q9Y2P5 690 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 CITO14578 2027 aa16.28■□□□□ 0.2
CCS-206ENST00000530961 KIAA1671Q9BY89 1806 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 GRXCR2A6NFK2 248 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 LGALS16A8MUM7 142 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 MBTPS2O43462 519 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 ATP1A3P13637 1013 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 MAGEA11P43364 429 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 EPHB3P54753 998 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 MFAP3P55082 362 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 RPL10AP62906 217 aaKnown RBP16.27■□□□□ 0.2
CCS-206ENST00000530961 FILIP1LQ4L180 1135 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 PTCRAQ6ISU1 281 aaPredicted RBP16.27■□□□□ 0.2
CCS-206ENST00000530961 VSTM1Q6UX27 236 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 RRAGAQ7L523 313 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 APTXQ7Z2E3 356 aaKnown RBP16.27■□□□□ 0.2
CCS-206ENST00000530961 ACOT1Q86TX2 421 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 PRSS33Q8NF86 280 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 SMG7Q92540 1137 aaKnown RBP16.27■□□□□ 0.2
CCS-206ENST00000530961 MYLPFQ96A32 169 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 TMEM176AQ96HP8 235 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 SEPT5Q99719 369 aaPredicted RBP16.27■□□□□ 0.2
CCS-206ENST00000530961 ANP32EQ9BTT0 268 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 APOL5Q9BWW9 433 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 CRISPLD1Q9H336 500 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 KIAA1257Q9ULG3 409 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 USP15Q9Y4E8 981 aaPredicted RBP16.27■□□□□ 0.2
CCS-206ENST00000530961 YIPF1Q9Y548 306 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 ASB3Q9Y575 518 aa16.27■□□□□ 0.2
CCS-206ENST00000530961 TDRD15B5MCY1 1934 aaKnown RBP16.27■□□□□ 0.19
CCS-206ENST00000530961 CCL16O15467 120 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 KRT37O76014 449 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 RFX1P22670 979 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 CYP27A1Q02318 531 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 UBXN1Q04323 297 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 KCNMA1Q12791 1236 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 TWF1Q12792 350 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 CBX2Q14781 532 aaPredicted RBP16.26■□□□□ 0.19
CCS-206ENST00000530961 SMAD2Q15796 467 aaKnown RBP16.26■□□□□ 0.19
CCS-206ENST00000530961 IQCEQ6IPM2 695 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 ARHGEF19Q8IW93 802 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 UBR7Q8N806 425 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 CEP295NLQ96MC4 621 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 ZNF512Q96ME7 567 aaPredicted RBP16.26■□□□□ 0.19
CCS-206ENST00000530961 HEXIM2Q96MH2 286 aaKnown RBP16.26■□□□□ 0.19
CCS-206ENST00000530961 TWNKQ96RR1 684 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 ELOVL4Q9GZR5 314 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 HMGXB4Q9UGU5 601 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 NLRC5Q86WI3 1866 aa16.26■□□□□ 0.19
CCS-206ENST00000530961 PTPRZ1P23471 2315 aaPredicted RBP16.25■□□□□ 0.19
CCS-206ENST00000530961 PKD1L2Q7Z442 2459 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 ATP8B3O60423 1300 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 PLXNA4Q9HCM2 1894 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 EPG5Q9HCE0 2579 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 PTPN2P17706 415 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 ACO1P21399 889 aaKnown RBP16.25■□□□□ 0.19
CCS-206ENST00000530961 CYP2F1P24903 491 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 RAD23BP54727 409 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 VEPH1Q14D04 833 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 ZNF394Q53GI3 561 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 KLHDC7AQ5VTJ3 777 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 ITIH5Q86UX2 942 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 TTC9BQ8N6N2 239 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 LEMD2Q8NC56 503 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 CYFIP2Q96F07 1278 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 KREMEN1Q96MU8 473 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 HNRNPABQ99729 332 aaKnown RBP16.25■□□□□ 0.19
CCS-206ENST00000530961 B3GNT5Q9BYG0 378 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 WDR6Q9NNW5 1121 aaKnown RBP16.25■□□□□ 0.19
CCS-206ENST00000530961 PLCB1Q9NQ66 1216 aa16.25■□□□□ 0.19
CCS-206ENST00000530961 CNTN6Q9UQ52 1028 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms