RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 PPP1R26Q5T8A7 1209 aaPredicted RBP14.48□□□□□ -0.09
SMCO4-205ENST00000529714 HGSNATQ68CP4 663 aa14.48□□□□□ -0.09
SMCO4-205ENST00000529714 LCLAT1Q6UWP7 414 aa14.48□□□□□ -0.09
SMCO4-205ENST00000529714 SPATA2LQ8IUW3 424 aaPredicted RBP14.48□□□□□ -0.09
SMCO4-205ENST00000529714 TFAP2BQ92481 460 aa14.48□□□□□ -0.09
SMCO4-205ENST00000529714 DDX1Q92499 740 aaKnown RBP14.48□□□□□ -0.09
SMCO4-205ENST00000529714 LRCH3Q96II8 777 aa14.48□□□□□ -0.09
SMCO4-205ENST00000529714 B3GNT5Q9BYG0 378 aa14.48□□□□□ -0.09
SMCO4-205ENST00000529714 FAM49BQ9NUQ9 324 aa14.48□□□□□ -0.09
SMCO4-205ENST00000529714 TMLHEQ9NVH6 421 aa14.48□□□□□ -0.09
SMCO4-205ENST00000529714 PCDHGC3Q9UN70 934 aa14.48□□□□□ -0.09
SMCO4-205ENST00000529714 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.48□□□□□ -0.09
SMCO4-205ENST00000529714 PCDHB5Q9Y5E4 795 aa14.48□□□□□ -0.09
SMCO4-205ENST00000529714 MTMR11A4FU01 709 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 RFXAPO00287 272 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 CCDC130P13994 396 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 FECHP22830 423 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 KLRC2P26717 231 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 ANXA13P27216 316 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 ARPP19P56211 112 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 CDR2Q01850 454 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 CYP27A1Q02318 531 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 ARID5AQ03989 594 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 KLHL30Q0D2K2 578 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 GRIN2CQ14957 1233 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 CCDC142Q17RM4 750 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 HABP4Q5JVS0 413 aaKnown RBP14.47□□□□□ -0.09
SMCO4-205ENST00000529714 LILRA6Q6PI73 481 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 WDR59Q6PJI9 974 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 VSTM1Q6UX27 236 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 RNF19BQ6ZMZ0 732 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 PAQR9Q6ZVX9 377 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 RTL10Q7L3V2 364 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 NOP9Q86U38 636 aaKnown RBP14.47□□□□□ -0.09
SMCO4-205ENST00000529714 FAM35AQ86V20 835 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 ANKRD52Q8NB46 1076 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 SLC2A14Q8TDB8 520 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 HDAC7Q8WUI4 952 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 SMARCD1Q96GM5 515 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 CDCA3Q99618 268 aaPredicted RBP14.47□□□□□ -0.09
SMCO4-205ENST00000529714 ZSWIM1Q9BR11 485 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 SYT11Q9BT88 431 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 PRDM12Q9H4Q4 367 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 ACP6Q9NPH0 428 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 HESX1Q9UBX0 185 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 TSPAN16Q9UKR8 245 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 PCDHGC5Q9Y5F6 944 aa14.47□□□□□ -0.09
SMCO4-205ENST00000529714 PLXNA3P51805 1871 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 TGM5O43548 720 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 CLASP2O75122 1294 aaKnown RBP14.46□□□□□ -0.09
SMCO4-205ENST00000529714 VNN2O95498 520 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 GLUD1P00367 558 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 SETSIPP0DME0 302 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 TUFMP49411 452 aaKnown RBP14.46□□□□□ -0.09
SMCO4-205ENST00000529714 CLCN4P51793 760 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 BCAT1P54687 386 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 CCDC173Q0VFZ6 552 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 DUSP6Q16828 381 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 PKDCCQ504Y2 493 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 TRIM72Q6ZMU5 477 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 VPS36Q86VN1 386 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 GLYCTKQ8IVS8 523 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 TCEAL8Q8IYN2 117 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 CEP295NLQ96MC4 621 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 AGPAT1Q99943 283 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 LPIN3Q9BQK8 851 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 MED10Q9BTT4 135 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 DUSP16Q9BY84 665 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 ZNF518BQ9C0D4 1074 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 LHX5Q9H2C1 402 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 NSUN3Q9H649 340 aaKnown RBP14.46□□□□□ -0.09
SMCO4-205ENST00000529714 HAUS4Q9H6D7 363 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 TLE6Q9H808 572 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 CSNK1G1Q9HCP0 422 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 ABI2Q9NYB9 513 aaPredicted RBP14.46□□□□□ -0.09
SMCO4-205ENST00000529714 DPP7Q9UHL4 492 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 FBXW11Q9UKB1 542 aa14.46□□□□□ -0.09
SMCO4-205ENST00000529714 CDH23Q9H251 3354 aa14.46□□□□□ -0.1
SMCO4-205ENST00000529714 MTCL1Q9Y4B5 1905 aaKnown RBP14.45□□□□□ -0.1
SMCO4-205ENST00000529714 SSU72P8A0A1W2PR75 194 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 MICAL2O94851 1124 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 CSPG5O95196 566 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 LSM8O95777 96 aaKnown RBP14.45□□□□□ -0.1
SMCO4-205ENST00000529714 FAM200BP0CF97 657 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 NPR3P17342 541 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 ADORA2BP29275 332 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 ELF1P32519 619 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 CDH5P33151 784 aaPredicted RBP14.45□□□□□ -0.1
SMCO4-205ENST00000529714 SLC8A3P57103 927 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 ADCY1Q08828 1119 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 GOLGA8FQ08AF8 430 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 GOLGA8DPQ0D2H9 430 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 BST2Q10589 180 aaKnown RBP14.45□□□□□ -0.1
SMCO4-205ENST00000529714 MAPK8IP2Q13387 824 aaPredicted RBP14.45□□□□□ -0.1
SMCO4-205ENST00000529714 MYO9BQ13459 2157 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 GOLGA7BQ2TAP0 167 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 TDRD12Q587J7 1177 aaKnown RBP14.45□□□□□ -0.1
SMCO4-205ENST00000529714 ELMSAN1Q6PJG2 1045 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 CCDC186Q7Z3E2 898 aa14.45□□□□□ -0.1
SMCO4-205ENST00000529714 ADGRD2Q7Z7M1 963 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms