RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 CSH2P0DML3 217 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 HAPLN1P10915 354 aaPredicted RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 SCP2P22307 547 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 U2AF2P26368 475 aaKnown RBP eCLIP9.71□□□□□ -0.86
VPS11-203ENST00000529545 TNFSF9P41273 254 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 IFNAR2P48551 515 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 DHPSP49366 369 aaPredicted RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 NEK4P51957 841 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 LMAN2Q12907 356 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 ZNF268Q14587 947 aaPredicted RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 MTF1Q14872 753 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 TMEM132DQ14C87 1099 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 ENOX2Q16206 610 aaKnown RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 C9orf57Q5W0N0 161 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 PMS2CLQ68D20 193 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 DTHD1Q6ZMT9 781 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 MON1AQ86VX9 555 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 TMEM130Q8N3G9 435 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 C4orf32Q8N8J7 132 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 TTC16Q8NEE8 873 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 OR10T2Q8NGX3 314 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 ZCCHC14Q8WYQ9 949 aaKnown RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 ATP2A3Q93084 1043 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 CHFRQ96EP1 664 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 CDK5RAP3Q96JB5 506 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 MSTO1Q9BUK6 570 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 ECT2Q9H8V3 914 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 FBRSL1Q9HCM7 1045 aaKnown RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 POLR3BQ9NW08 1133 aaPredicted RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 DUS2Q9NX74 493 aaKnown RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 KCND2Q9NZV8 630 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 UXTQ9UBK9 157 aaPredicted RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 TBX20Q9UMR3 447 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 MAGED2Q9UNF1 606 aaPredicted RBP9.71□□□□□ -0.86
VPS11-203ENST00000529545 INVSQ9Y283 1065 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 PCDHB5Q9Y5E4 795 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 DENND4CQ5VZ89 1909 aa9.71□□□□□ -0.86
VPS11-203ENST00000529545 ANK1P16157 1881 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 THADAQ6YHU6 1953 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 FRYQ5TBA9 3013 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 PP2D1A8MPX8 630 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 C3orf80F5H4A9 247 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 PIRO00625 290 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 PPEF2O14830 753 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 PRPF40AO75400 957 aaKnown RBP9.7□□□□□ -0.86
VPS11-203ENST00000529545 ALDH1A2O94788 518 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 F11P03951 625 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 USP17L7P0C7H9 530 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 CDC25AP30304 524 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 NMT1P30419 496 aaKnown RBP9.7□□□□□ -0.86
VPS11-203ENST00000529545 TAF6P49848 677 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 CDR1P51861 262 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 TSPY1Q01534 308 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 FAM160A1Q05DH4 1040 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 NFE2Q16621 373 aaPredicted RBP9.7□□□□□ -0.86
VPS11-203ENST00000529545 TXNDC8Q6A555 127 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 JADE1Q6IE81 842 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 FAM184AQ8NB25 1140 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 DEFB124Q8NES8 71 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 FBXO18Q8NFZ0 1043 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 OSCP1Q8WVF1 389 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 PIGKQ92643 395 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 GATA6Q92908 595 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 PYM1Q9BRP8 204 aaKnown RBP9.7□□□□□ -0.86
VPS11-203ENST00000529545 NUSAP1Q9BXS6 441 aaKnown RBP9.7□□□□□ -0.86
VPS11-203ENST00000529545 HAPLN2Q9GZV7 340 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 TRPC7Q9HCX4 862 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 WASF3Q9UPY6 502 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 DERAQ9Y315 318 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 NEUROG3Q9Y4Z2 214 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 TCHHQ07283 1943 aa9.7□□□□□ -0.86
VPS11-203ENST00000529545 TRAV19A0A0A6YYK7 116 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 CDX4O14627 284 aaPredicted RBP9.69□□□□□ -0.86
VPS11-203ENST00000529545 TOP3BO95985 862 aaKnown RBP9.69□□□□□ -0.86
VPS11-203ENST00000529545 CKMP06732 381 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 ADRB2P07550 413 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 HMGA1P17096 107 aaKnown RBP9.69□□□□□ -0.86
VPS11-203ENST00000529545 ABCD1P33897 745 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 PRPHP41219 470 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 DPP6P42658 865 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 TSC2P49815 1807 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 NCKAP1LP55160 1127 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 RPL10AP62906 217 aaKnown RBP9.69□□□□□ -0.86
VPS11-203ENST00000529545 IRX4P78413 519 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 HMGN5P82970 282 aaKnown RBP9.69□□□□□ -0.86
VPS11-203ENST00000529545 WSCD1Q658N2 575 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 LMBRD2Q68DH5 695 aaPredicted RBP9.69□□□□□ -0.86
VPS11-203ENST00000529545 ANO7Q6IWH7 933 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 KIAA1211LQ6NV74 962 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 LRSAM1Q6UWE0 723 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 KCNK18Q7Z418 384 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 TMEM150AQ86TG1 271 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 TTC30AQ86WT1 665 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 SYT2Q8N9I0 419 aaPredicted RBP9.69□□□□□ -0.86
VPS11-203ENST00000529545 FSIP1Q8NA03 581 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 SPACA7Q96KW9 195 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 CNOT6LQ96LI5 555 aaKnown RBP9.69□□□□□ -0.86
VPS11-203ENST00000529545 LLPHQ9BRT6 129 aaKnown RBP9.69□□□□□ -0.86
VPS11-203ENST00000529545 TPSD1Q9BZJ3 242 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms