RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 PRCCQ92733 491 aaPredicted RBP11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 ZBTB10Q96DT7 871 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 NLRP4Q96MN2 994 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 PITPNM3Q9BZ71 974 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 INO80BQ9C086 356 aaPredicted RBP11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 LHX5Q9H2C1 402 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 TRABDQ9H4I3 376 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 CXorf56Q9H5V9 222 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 KIF9Q9HAQ2 790 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 PPP2R3BQ9Y5P8 575 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 CFAP73A6NFT4 308 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 NOP56O00567 594 aaKnown RBP11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 SOCS7O14512 581 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 MED7O43513 233 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 GAS2O43903 313 aaKnown RBP11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 CST8O60676 142 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 ASMTLO95671 621 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 PGK2P07205 417 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 KRT15P19012 456 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 KDELR1P24390 212 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 GDF10P55107 478 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 BNIP1Q12981 228 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 HADHQ16836 314 aaKnown RBP11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 CELF3Q5SZQ8 465 aaKnown RBP11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 FAM47EQ6ZV65 393 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 FITM2Q8N6M3 262 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 EMC1Q8N766 993 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 DENND1AQ8TEH3 1009 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 ADAM33Q9BZ11 813 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 FZD8Q9H461 694 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 UBN1Q9NPG3 1134 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 SHOC2Q9UQ13 582 aa11.05□□□□□ -0.64
AP002008.3-201ENST00000528614 KIF1CO43896 1103 aaKnown RBP11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 ATP6V1G2O95670 118 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 KRT7P08729 469 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 CXCL8P10145 99 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 RAD23BP54727 409 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 GPX6P59796 221 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 GAD2Q05329 585 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 MGAT5Q09328 741 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 ZNF667Q5HYK9 610 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 PLPPR4Q7Z2D5 763 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 PCGF5Q86SE9 256 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 PNMA8AQ86V59 439 aaPredicted RBP11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 EXOC8Q8IYI6 725 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 C4orf33Q8N1A6 199 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 RMDN2Q96LZ7 410 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 CPXM1Q96SM3 734 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 SDCBP2Q9H190 292 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 MINDY3Q9H8M7 445 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 RPF1Q9H9Y2 349 aaKnown RBP11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 METTL5Q9NRN9 209 aaKnown RBP11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 KLHL14Q9P2G3 628 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 SIX4Q9UIU6 781 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 PNMA3Q9UL41 463 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 SUFUQ9UMX1 484 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 LOC285556D6RIA3 1793 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 A0A1W2PPM1 405 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 NDC80O14777 642 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 HGSO14964 777 aaPredicted RBP11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 PRPF4O43172 522 aaKnown RBP eCLIP11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 CD48P09326 243 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 NQO1P15559 274 aaKnown RBP11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 CTCFP49711 727 aaPredicted RBP11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 KCNJ2P63252 427 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 FNBP1LQ5T0N5 605 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 ANKRD22Q5VYY1 191 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 EFCAB12Q6NXP0 572 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 XYLT1Q86Y38 959 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 GBP7Q8N8V2 638 aaPredicted RBP11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 MAGEC3Q8TD91 643 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 CPT1BQ92523 772 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 COPS5Q92905 334 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 GRAMD1AQ96CP6 724 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 SPATA33Q96N06 139 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 SMC6Q96SB8 1091 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 BCO2Q9BYV7 579 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 CDT1Q9H211 546 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 SYNCQ9H7C4 482 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 RXFP1Q9HBX9 757 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 PCSK1NQ9UHG2 260 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 BAIAP2L1Q9UHR4 511 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 EFR3BQ9Y2G0 817 aa11.04□□□□□ -0.64
AP002008.3-201ENST00000528614 MAGEB2O15479 319 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 ERBB2P04626 1255 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 RPA3P35244 121 aaPredicted RBP11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 RPL22P35268 128 aaKnown RBP11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 CLCN3P51790 818 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 MYO1EQ12965 1108 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 TFDP1Q14186 410 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 TAF5Q15542 800 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 HIF1AQ16665 826 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 MSS51Q4VC12 460 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 RNF43Q68DV7 783 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 BBS12Q6ZW61 710 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 CEP57Q86XR8 500 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 ECHDC2Q86YB7 292 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 PPIL6Q8IXY8 311 aa11.03□□□□□ -0.64
AP002008.3-201ENST00000528614 TAB3Q8N5C8 712 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms