RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SLITRK6Q9H5Y7 841 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 TASP1Q9H6P5 420 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 CRTAC1Q9NQ79 661 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 TRPV5Q9NQA5 729 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 ARHGEF3Q9NR81 526 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 UXTQ9UBK9 157 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 NXF1Q9UBU9 619 aaKnown RBP12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 CA14Q9ULX7 337 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 ZDBF2Q9HCK1 2354 aa12.94□□□□□ -0.34
TRAPPC4-209ENST00000528230 HCRTO43612 131 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 GADD45BO75293 160 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 NOL4O94818 638 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 ASS1P00966 412 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 F11P03951 625 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 PSMC3P17980 439 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 PTPN1P18031 435 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 DDX6P26196 483 aaKnown RBP eCLIP12.93□□□□□ -0.343e-7■□□□□ 9.5
TRAPPC4-209ENST00000528230 ANP32AP39687 249 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 CDR1P51861 262 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 FKBP3Q00688 224 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 LRRC63Q05C16 580 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 STIM1Q13586 685 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 SLC44A4Q53GD3 710 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 GPR158Q5T848 1215 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 IER5LQ5T953 404 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 CWF19L1Q69YN2 538 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 MFSD6LQ8IWD5 586 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 ZC3H3Q8IXZ2 948 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 ADSSL1Q8N142 457 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 TMEM105Q8N8V8 129 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 FLCNQ8NFG4 579 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 DNASE1L2Q92874 299 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 FAM122AQ96E09 287 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 TRMT2BQ96GJ1 504 aaKnown RBP12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 DHTKD1Q96HY7 919 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 SPATA17Q96L03 361 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 IRF2BPLQ9H1B7 796 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 OBP2AQ9NY56 170 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 NME7Q9Y5B8 376 aa12.93□□□□□ -0.34
TRAPPC4-209ENST00000528230 ANAPC1Q9H1A4 1944 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 SLC38A8A6NNN8 435 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 A8MXQ7 604 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 STX10O60499 249 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 HLA-DRAP01903 254 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 EPB41P11171 864 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 PLA2G5P39877 138 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 VIPR2P41587 438 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 GPR15P49685 360 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 PTPN5P54829 565 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 NLRP12P59046 1061 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 PSMC1P62191 440 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 UBE2HP62256 183 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 MLF2Q15773 248 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 DDR2Q16832 855 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 ANKRD40Q6AI12 368 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 VITQ6UXI7 678 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 TMEM150AQ86TG1 271 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 ARID3BQ8IVW6 561 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 ERCC4Q92889 916 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 IRF7Q92985 503 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 MYLPFQ96A32 169 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 PCED1BQ96HM7 432 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 FAXDC2Q96IV6 333 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 TNIP3Q96KP6 325 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 DDX23Q9BUQ8 820 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 TBC1D17Q9HA65 648 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 TMEM8AQ9HCN3 771 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 EHD2Q9NZN4 543 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 MAN1B1Q9UKM7 699 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 MIA3Q5JRA6 1907 aa12.92□□□□□ -0.34
TRAPPC4-209ENST00000528230 HEPACAM2A8MVW5 462 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 STK25O00506 426 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 PSMA7O14818 248 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 TRIM66O15016 1216 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 SLC16A3O15427 465 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 GALR2O43603 387 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 PI15O43692 258 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 RFX1P22670 979 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 BDNFP23560 247 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 CCNE1P24864 410 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 GRIK1P39086 918 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 PIK3CAP42336 1068 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 GCLMP48507 274 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 MLLT6P55198 1093 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 CDH8P55286 799 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 CYP27A1Q02318 531 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 PPP3CAQ08209 521 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 CCDC142Q17RM4 750 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 MDH1BQ5I0G3 518 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 STXBP5Q5T5C0 1151 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 KRT39Q6A163 491 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 FOXR2Q6PJQ5 311 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 UNC93AQ86WB7 457 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 SCN4BQ8IWT1 228 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 CRYBG2Q8N1P7 616 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 B3GALNT2Q8NCR0 500 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 PRSS33Q8NF86 280 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 MRPS31Q92665 395 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 C8orf48Q96LL4 319 aa12.91□□□□□ -0.34
TRAPPC4-209ENST00000528230 NELL2Q99435 816 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms