RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 CACNB3P54284 484 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 MCCD1P59942 119 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-214ENST00000528165 PLEKHA7Q6IQ23 1121 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 APOBEC3HQ6NTF7 200 aaKnown RBP15.36■□□□□ 0.05
CAPN1-214ENST00000528165 ACAD11Q709F0 780 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 AMIGO3Q86WK7 504 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 TREML1Q86YW5 311 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 FEZF2Q8TBJ5 459 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 NKD2Q969F2 451 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-214ENST00000528165 RIT2Q99578 217 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 IQCGQ9H095 443 aaKnown RBP15.36■□□□□ 0.05
CAPN1-214ENST00000528165 EBF3Q9H4W6 596 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 GPAMQ9HCL2 828 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 GINM1Q9NU53 330 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 LMCD1Q9NZU5 365 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 PI4KBQ9UBF8 816 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 SLC7A8Q9UHI5 535 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 TAGLN3Q9UI15 199 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 PPM1HQ9ULR3 514 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 PHF24Q9UPV7 400 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 LOXHD1Q8IVV2 1947 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 ZC3H11AO75152 810 aaKnown RBP eCLIP15.36■□□□□ 0.05
CAPN1-214ENST00000528165 VIL1P09327 827 aaKnown RBP15.36■□□□□ 0.05
CAPN1-214ENST00000528165 TCF4P15884 667 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 SSTR3P32745 418 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-214ENST00000528165 PTK7Q13308 1070 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 MTM1Q13496 603 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 ABCB5Q2M3G0 1257 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 BBS9Q3SYG4 887 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 ANKRD22Q5VYY1 191 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 TRMT1LQ7Z2T5 733 aaKnown RBP15.36■□□□□ 0.05
CAPN1-214ENST00000528165 RASSF3Q86WH2 238 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 POMGNT1Q8WZA1 660 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 VCPIP1Q96JH7 1222 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 PARVAQ9NVD7 372 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 STK32BQ9NY57 414 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 TBX20Q9UMR3 447 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 PLA2G4CQ9UP65 541 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 SNCAIPQ9Y6H5 919 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 IVNS1ABPQ9Y6Y0 642 aa15.36■□□□□ 0.05
CAPN1-214ENST00000528165 FKBP6O75344 327 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 NCKAP1LP55160 1127 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 NOMO3P69849 1222 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 CYP24A1Q07973 514 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 MAP7Q14244 749 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 PABPC1LQ4VXU2 614 aaKnown RBP15.35■□□□□ 0.05
CAPN1-214ENST00000528165 TRIM72Q6ZMU5 477 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 SERAC1Q96JX3 654 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 MFSD14AQ96MC6 490 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 CHCHD3Q9NX63 227 aaKnown RBP15.35■□□□□ 0.05
CAPN1-214ENST00000528165 TMCO1Q9UM00 188 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 SMCHD1A6NHR9 2005 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 DDTLA6NHG4 134 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-214ENST00000528165 BBOX1O75936 387 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 PENKP01210 267 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-214ENST00000528165 CFHP08603 1231 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 PABPC4LP0CB38 370 aaKnown RBP15.35■□□□□ 0.05
CAPN1-214ENST00000528165 PYGBP11216 843 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 ECE1P42892 770 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 TFDP3Q5H9I0 405 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 WDR44Q5JSH3 913 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 TMCO4Q5TGY1 634 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 PRR5LQ6MZQ0 368 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 RAPH1Q70E73 1250 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 PRPF39Q86UA1 669 aaKnown RBP15.35■□□□□ 0.05
CAPN1-214ENST00000528165 LCA5Q86VQ0 697 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 SLC25A41Q8N5S1 370 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 OR6Y1Q8NGX8 325 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 NAT14Q8WUY8 206 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 CPT1BQ92523 772 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 COA1Q9GZY4 146 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 E5RJQ4 531 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 KLF11O14901 512 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 INHBAP08476 426 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 STAT2P52630 851 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 MED21Q13503 144 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 FAM102BQ5T8I3 360 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 HHIPL2Q6UWX4 724 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 PDIK1LQ8N165 341 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 TAB3Q8N5C8 712 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-214ENST00000528165 HIC2Q96JB3 615 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 WDR83Q9BRX9 315 aaKnown RBP15.35■□□□□ 0.05
CAPN1-214ENST00000528165 WWP1Q9H0M0 922 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 TBC1D30Q9Y2I9 924 aa15.35■□□□□ 0.05
CAPN1-214ENST00000528165 hCG_1818297A0A087WSY0 165 aa15.34■□□□□ 0.05
CAPN1-214ENST00000528165 RPL7AP62424 266 aaKnown RBP15.34■□□□□ 0.05
CAPN1-214ENST00000528165 HNRNPDQ14103 355 aaKnown RBP15.34■□□□□ 0.05
CAPN1-214ENST00000528165 PHF13Q86YI8 300 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-214ENST00000528165 ABRAQ8N0Z2 381 aa15.34■□□□□ 0.05
CAPN1-214ENST00000528165 ACSF2Q96CM8 615 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-214ENST00000528165 FAM84AQ96KN4 292 aa15.34■□□□□ 0.05
CAPN1-214ENST00000528165 KIFC3Q9BVG8 833 aa15.34■□□□□ 0.05
CAPN1-214ENST00000528165 COL16A1Q07092 1604 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-214ENST00000528165 LRRC36Q1X8D7 754 aa15.34■□□□□ 0.05
CAPN1-214ENST00000528165 CRY2Q49AN0 593 aa15.34■□□□□ 0.05
CAPN1-214ENST00000528165 BRDTQ58F21 947 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-214ENST00000528165 TATDN1Q6P1N9 297 aa15.34■□□□□ 0.05
CAPN1-214ENST00000528165 SPATA24Q86W54 205 aa15.34■□□□□ 0.05
CAPN1-214ENST00000528165 ARID3BQ8IVW6 561 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-214ENST00000528165 NAT8LQ8N9F0 302 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms