RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 TMC7Q7Z402 723 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 BANPQ8N9N5 519 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 FNDC8Q8TC99 324 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 LRGUKQ96M69 825 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 SPATA31C1P0DKV0 1188 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 GLRA2P23416 452 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 ALDH1B1P30837 517 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 TRIM50Q86XT4 487 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 RHOT1Q8IXI2 618 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 NUP93Q8N1F7 819 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.06□□□□□ -0.32
TSKU-203ENST00000527881 DIS3LQ8TF46 1054 aaKnown RBP13.06□□□□□ -0.32
TSKU-203ENST00000527881 DHX38Q92620 1227 aaKnown RBP13.06□□□□□ -0.32
TSKU-203ENST00000527881 TMEM121Q9BTD3 319 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 APOL6Q9BWW8 343 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 KCNK4Q9NYG8 393 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 MAD1L1Q9Y6D9 718 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 GLI3P10071 1580 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 K7ENM7 598 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 TNFAIP8O95379 198 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 CIITAP33076 1130 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 ARHGAP4P98171 946 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 BST1Q10588 318 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 PICALMQ13492 652 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 GRM2Q14416 872 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 PARP10Q53GL7 1025 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 DENND5BQ6ZUT9 1274 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 FBXO33Q7Z6M2 555 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 METTL25Q8N6Q8 603 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 SMYD1Q8NB12 490 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 FBXO36Q8NEA4 188 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 ACSF2Q96CM8 615 aaPredicted RBP13.06□□□□□ -0.32
TSKU-203ENST00000527881 TRIM56Q9BRZ2 755 aaKnown RBP13.06□□□□□ -0.32
TSKU-203ENST00000527881 TCHPQ9BT92 498 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 POLR3CQ9BUI4 534 aaPredicted RBP13.06□□□□□ -0.32
TSKU-203ENST00000527881 RAB20Q9NX57 234 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 TBC1D30Q9Y2I9 924 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 TSC22D4Q9Y3Q8 395 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 AK5Q9Y6K8 562 aa13.06□□□□□ -0.32
TSKU-203ENST00000527881 ALOX15BO15296 676 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 PPP1R11O60927 126 aaPredicted RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 TGDSO95455 350 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 KRT1P04264 644 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 TFPTP0C1Z6 253 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 POLR2MP0CAP2 368 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 SMIM18P0DKX4 95 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 FDX1P10109 184 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 ALDH1A3P47895 512 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 ATXN3P54252 364 aaPredicted RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 OASLQ15646 514 aaKnown RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 EFHC2Q5JST6 749 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 ATG16L1Q676U5 607 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 ACAD10Q6JQN1 1059 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 RELL1Q8IUW5 271 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 NUDCD3Q8IVD9 361 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 SLF2Q8IX21 1173 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 TEKT1Q969V4 418 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 E2F7Q96AV8 911 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 EIF2AK1Q9BQI3 630 aaKnown RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 SPATA7Q9P0W8 599 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 RABGEF1Q9UJ41 708 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 NOCTQ9UK39 431 aaKnown RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 TOM1L1O75674 476 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 HSPA1LP34931 641 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 NSFP46459 744 aaKnown RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 CD97P48960 835 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 TMED10P49755 219 aaKnown RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 OXCT1P55809 520 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 GAD2Q05329 585 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 MORF4L2Q15014 288 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 DPP8Q6V1X1 898 aaPredicted RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 AMIGO2Q86SJ2 522 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 PASD1Q8IV76 773 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 DCUN1D1Q96GG9 259 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 CCT7Q99832 543 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 CORO1BQ9BR76 489 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 MRPS26Q9BYN8 205 aaKnown RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 C10orf88Q9H8K7 445 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 PPCSQ9HAB8 311 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 OLFML3Q9NRN5 406 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 SELENONQ9NZV5 590 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 TELO2Q9Y4R8 837 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 F5H6K3 240 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 EIF3DO15371 548 aaKnown RBP eCLIP13.05□□□□□ -0.32
TSKU-203ENST00000527881 ADCY6O43306 1168 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 XPOTO43592 962 aaKnown RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 NCF2P19878 526 aaPredicted RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 KLRC2P26717 231 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 SLC5A2P31639 672 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 COPAP53621 1224 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 HDAC4P56524 1084 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 GPX6P59796 221 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 ALCAMQ13740 583 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 NKX1-1Q15270 411 aaPredicted RBP13.05□□□□□ -0.32
TSKU-203ENST00000527881 USH1GQ495M9 461 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 ATP13A4Q4VNC1 1196 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 CCDC80Q76M96 950 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 DEFB107AQ8IZN7 70 aa13.05□□□□□ -0.32
TSKU-203ENST00000527881 SLC4A9Q96Q91 983 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms