RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 DMWDQ09019 674 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 SPEM2Q0P670 501 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 GRSF1Q12849 480 aaKnown RBP eCLIP24■■□□□ 1.43
TRAPPC4-208ENST00000527680 SOWAHAQ2M3V2 549 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 WDR44Q5JSH3 913 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 TRIM68Q6AZZ1 485 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 LAIR1Q6GTX8 287 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 LONP2Q86WA8 852 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 CBWD2Q8IUF1 395 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 RDH13Q8NBN7 331 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 GLIS3Q8NEA6 775 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 CXorf38Q8TB03 319 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 FAM83CQ9BQN1 747 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 KIF9Q9HAQ2 790 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 DMXL1Q9Y485 3027 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 DENND4CQ5VZ89 1909 aa24■■□□□ 1.43
TRAPPC4-208ENST00000527680 CEP250Q9BV73 2442 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 SOBPA7XYQ1 873 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 HRO43593 1189 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 CNR2P34972 360 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 CCINQ13939 588 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 FOXD4L5Q5VV16 416 aaPredicted RBP23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 DPH6Q7L8W6 267 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 IQUBQ8NA54 791 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 OR5B17Q8NGF7 314 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 SPATA18Q8TC71 538 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 FOXD4L4Q8WXT5 416 aaPredicted RBP23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 MMS19Q96T76 1030 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 CUEDC2Q9H467 287 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 KIAA1586Q9HCI6 787 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 HSPBP1Q9NZL4 362 aa23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 CDV3Q9UKY7 258 aaKnown RBP23.99■■□□□ 1.43
TRAPPC4-208ENST00000527680 ATG2BQ96BY7 2078 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 MED19A0JLT2 244 aaPredicted RBP23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 GABRDO14764 452 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 HCRTO43612 131 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 PPP6R2O75170 966 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 PDGFRBP09619 1106 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 SRSF5Q13243 272 aaKnown RBP23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 C4orf50Q6ZRC1 276 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 CEP68Q76N32 757 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 FSIP1Q8NA03 581 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 CYP2S1Q96SQ9 504 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 BACH2Q9BYV9 841 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 TRIM9Q9C026 710 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 HPS4Q9NQG7 708 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 KBTBD4Q9NVX7 518 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 C2orf42Q9NWW7 574 aa23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 MAGEC2Q9UBF1 373 aaPredicted RBP23.98■■□□□ 1.43
TRAPPC4-208ENST00000527680 K7ESF4 209 aa23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 ATP2C2O75185 946 aa23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 NOL4O94818 638 aa23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 PAPSS2O95340 614 aaPredicted RBP23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 RETP07949 1114 aa23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 TNNI1P19237 187 aa23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 CCDC142Q17RM4 750 aa23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 FOXD4L6Q3SYB3 417 aaPredicted RBP23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 CFAP221Q4G0U5 840 aa23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 FOXD4L3Q6VB84 417 aaPredicted RBP23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 FUBP3Q96I24 572 aaKnown RBP eCLIP23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 FNBP1Q96RU3 617 aa23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 PKMYT1Q99640 499 aa23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 SYT15Q9BQS2 421 aa23.97■■□□□ 1.43
TRAPPC4-208ENST00000527680 TRAV19A0A0A6YYK7 116 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 CUTAO60888 179 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 ATG13O75143 517 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 CKMP06732 381 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 USP17L7P0C7H9 530 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 DLATP10515 647 aaKnown RBP23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 ARSAP15289 507 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 LMO2P25791 158 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 GRIK1P39086 918 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 PSMC1P62191 440 aaKnown RBP23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 PDGFRLQ15198 375 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 E2F4Q16254 413 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 ZNF507Q8TCN5 953 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 EXOC4Q96A65 974 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 TRMT2BQ96GJ1 504 aaKnown RBP23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 MYRFLQ96LU7 910 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 PARD6AQ9NPB6 346 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 CDH9Q9ULB4 789 aa23.96■■□□□ 1.43
TRAPPC4-208ENST00000527680 RALGAPA1Q6GYQ0 2036 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 PTPRJQ12913 1337 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 OTOL1A6NHN0 477 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 CLIC2O15247 247 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 EIF3DO15371 548 aaKnown RBP eCLIP23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 TGM1P22735 817 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 HOXD13P35453 343 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 ATXN1P54253 815 aaKnown RBP23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 CYP27A1Q02318 531 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 FAM160A1Q05DH4 1040 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 ZNF268Q14587 947 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 MAPRE1Q15691 268 aaKnown RBP23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 TMEM196Q5HYL7 178 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 FAM26FQ5R3K3 315 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 FAM171BQ6P995 826 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 WDR49Q8IV35 697 aa23.95■■□□□ 1.42
TRAPPC4-208ENST00000527680 NELFCDQ8IXH7 590 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms