RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PDGFRBP09619 1106 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 PTPN1P18031 435 aaKnown RBP21.67■■□□□ 1.06
SMCO4-203ENST00000526869 COMTP21964 271 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 IGFBP6P24592 240 aaPredicted RBP21.67■■□□□ 1.06
SMCO4-203ENST00000526869 PCSK1P29120 753 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 PAFAH1B1P43034 410 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 BST2Q10589 180 aaKnown RBP21.67■■□□□ 1.06
SMCO4-203ENST00000526869 TCTN1Q2MV58 587 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 CFAP221Q4G0U5 840 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 C2CD6Q53TS8 623 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 CCDC181Q5TID7 509 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 XYLT1Q86Y38 959 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 UBA3Q8TBC4 463 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 CAPZA3Q96KX2 299 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 SLC4A5Q9BY07 1137 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 MRPL9Q9BYD2 267 aaKnown RBP21.67■■□□□ 1.06
SMCO4-203ENST00000526869 SYNCQ9H7C4 482 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 FAM49BQ9NUQ9 324 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 DDX43Q9NXZ2 648 aaKnown RBP21.67■■□□□ 1.06
SMCO4-203ENST00000526869 IP6K2Q9UHH9 426 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 CDH9Q9ULB4 789 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 TTC3P53804 2025 aa21.67■■□□□ 1.06
SMCO4-203ENST00000526869 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.66■■□□□ 1.06
SMCO4-203ENST00000526869 SIGLEC16A6NMB1 481 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 TMEM110-MUSTN1A8MSY1 372 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 SPOPO43791 374 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 DDHD2O94830 711 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 CXCR5P32302 372 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 CTNNA1P35221 906 aaKnown RBP21.66■■□□□ 1.06
SMCO4-203ENST00000526869 RPL34P49207 117 aaKnown RBP21.66■■□□□ 1.06
SMCO4-203ENST00000526869 PSMC1P62191 440 aaKnown RBP21.66■■□□□ 1.06
SMCO4-203ENST00000526869 CLUL1Q15846 466 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 LRRC26Q2I0M4 334 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 LLGL2Q6P1M3 1020 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 RASGEF1CQ8N431 466 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.66■■□□□ 1.06
SMCO4-203ENST00000526869 SLC35F5Q8WV83 523 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 UBXN4Q92575 508 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 CASD1Q96PB1 797 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 FAM193BQ96PV7 902 aaPredicted RBP21.66■■□□□ 1.06
SMCO4-203ENST00000526869 SYT15Q9BQS2 421 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 TTC7AQ9ULT0 858 aaPredicted RBP21.66■■□□□ 1.06
SMCO4-203ENST00000526869 PCDHB8Q9UN66 801 aa21.66■■□□□ 1.06
SMCO4-203ENST00000526869 MICAL3Q7RTP6 2002 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 KIAA0355O15063 1070 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 HCRTO43612 131 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 ERBB2P04626 1255 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 RNASELQ05823 741 aaKnown RBP21.65■■□□□ 1.06
SMCO4-203ENST00000526869 CYP4A22Q5TCH4 519 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 TMEM110Q86TL2 294 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 ZNF280BQ86YH2 543 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 ZDHHC17Q8IUH5 632 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 NIPA2Q8N8Q9 360 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 ACTRT1Q8TDG2 376 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 FNIP1Q8TF40 1166 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 BTBD6Q96KE9 485 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 PSMB7Q99436 277 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 PCDHA3Q9Y5H8 950 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 TET1Q8NFU7 2136 aa21.65■■□□□ 1.06
SMCO4-203ENST00000526869 PDE2AO00408 941 aaPredicted RBP21.64■■□□□ 1.05
SMCO4-203ENST00000526869 B4GALT3O60512 393 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 CCDC130P13994 396 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 SCNN1AP37088 669 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 PLCB3Q01970 1234 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 PDE4CQ08493 712 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 IKBKEQ14164 716 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 DCUN1D2Q6PH85 259 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 PHLDB2Q86SQ0 1253 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 SLC2A14Q8TDB8 520 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 RABGGTAQ92696 567 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 HSFY1Q96LI6 401 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 ACBD6Q9BR61 282 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 TMEM175Q9BSA9 504 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 TRIM7Q9C029 511 aa21.64■■□□□ 1.05
SMCO4-203ENST00000526869 TRAPPC3O43617 180 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 TIMP1P01033 207 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 KRT3P12035 628 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 ACADSBP45954 432 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 BRCC3P46736 316 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 PLA2G4AP47712 749 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 PEX5P50542 639 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 DNA2P51530 1060 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 SLC8A3P57103 927 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 PIGHQ14442 188 aaPredicted RBP21.63■■□□□ 1.05
SMCO4-203ENST00000526869 FUKQ8N0W3 1084 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 MCEEQ96PE7 176 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 DUSP16Q9BY84 665 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 CRTAC1Q9NQ79 661 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 LTBP2Q14767 1821 aa21.63■■□□□ 1.05
SMCO4-203ENST00000526869 E5RJQ4 531 aa21.62■■□□□ 1.05
SMCO4-203ENST00000526869 PGRMC1O00264 195 aaKnown RBP21.62■■□□□ 1.05
SMCO4-203ENST00000526869 XPO1O14980 1071 aaKnown RBP21.62■■□□□ 1.05
SMCO4-203ENST00000526869 PSTPIP1O43586 416 aa21.62■■□□□ 1.05
SMCO4-203ENST00000526869 CEP104O60308 925 aa21.62■■□□□ 1.05
SMCO4-203ENST00000526869 ADORA2BP29275 332 aa21.62■■□□□ 1.05
SMCO4-203ENST00000526869 RPL7AP62424 266 aaKnown RBP21.62■■□□□ 1.05
SMCO4-203ENST00000526869 PTPROQ16827 1216 aa21.62■■□□□ 1.05
SMCO4-203ENST00000526869 KIAA0319Q5VV43 1072 aa21.62■■□□□ 1.05
SMCO4-203ENST00000526869 PMF1Q6P1K2 205 aa21.62■■□□□ 1.05
SMCO4-203ENST00000526869 DEFB128Q7Z7B8 93 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms