RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 ZNF287Q9HBT7 754 aa6.95□□□□□ -1.3
CSTF3-207ENST00000526480 SSU72Q9NP77 194 aaKnown RBP6.95□□□□□ -1.3
CSTF3-207ENST00000526480 MAN1C1Q9NR34 630 aa6.95□□□□□ -1.3
CSTF3-207ENST00000526480 HEBP1Q9NRV9 189 aa6.95□□□□□ -1.3
CSTF3-207ENST00000526480 TOMM22Q9NS69 142 aa6.95□□□□□ -1.3
CSTF3-207ENST00000526480 SIRPGQ9P1W8 387 aa6.95□□□□□ -1.3
CSTF3-207ENST00000526480 PCOLCE2Q9UKZ9 415 aa6.95□□□□□ -1.3
CSTF3-207ENST00000526480 IRAK3Q9Y616 596 aa6.95□□□□□ -1.3
CSTF3-207ENST00000526480 STK36Q9NRP7 1315 aa6.95□□□□□ -1.3
CSTF3-207ENST00000526480 IGSF9BQ9UPX0 1349 aa6.95□□□□□ -1.3
CSTF3-207ENST00000526480 BSNQ9UPA5 3926 aa6.95□□□□□ -1.3
CSTF3-207ENST00000526480 SPTBN1Q01082 2364 aaKnown RBP6.94□□□□□ -1.3
CSTF3-207ENST00000526480 A0A1W2PQH9 124 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 CCDC69A6NI79 296 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 GOLGA8AA7E2F4 631 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 CDX4O14627 284 aaPredicted RBP6.94□□□□□ -1.3
CSTF3-207ENST00000526480 INPPL1O15357 1258 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 TSPY3P0CV98 308 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 TSPY8P0CW00 308 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 SNHG28P0DPA3 235 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 CTSAP10619 480 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 GNAT1P11488 350 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 RXRAP19793 462 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 SYT1P21579 422 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 CNR2P34972 360 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 CCR10P46092 362 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 FAM193AP78312 1265 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 GRM4Q14833 912 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 STXBP2Q15833 593 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 PPP2R5EQ16537 467 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 MARCH8Q5T0T0 291 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 IFIT1BQ5T764 474 aaKnown RBP6.94□□□□□ -1.3
CSTF3-207ENST00000526480 PRAMEF13Q5VWM6 474 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 DAB2IPQ5VWQ8 1189 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 ARMCX6Q7L4S7 300 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 MICU3Q86XE3 530 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 ZNF444Q8N0Y2 327 aaPredicted RBP6.94□□□□□ -1.3
CSTF3-207ENST00000526480 ARMC10Q8N2F6 343 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 FANCBQ8NB91 859 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 CMASQ8NFW8 434 aaPredicted RBP6.94□□□□□ -1.3
CSTF3-207ENST00000526480 FBLIM1Q8WUP2 373 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 SYNPO2Q9UMS6 1093 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 SMC3Q9UQE7 1217 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 MTMR6Q9Y217 621 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 SLC12A7Q9Y666 1083 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 OTOGQ6ZRI0 2925 aa6.94□□□□□ -1.3
CSTF3-207ENST00000526480 ERICH2A1L162 156 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 NCAM2O15394 837 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 STX6O43752 255 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 LRIG2O94898 1065 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 PLEKHA8P1O95397 391 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 HSP90AA1P07900 732 aaKnown RBP6.93□□□□□ -1.3
CSTF3-207ENST00000526480 CNPP09543 421 aaKnown RBP6.93□□□□□ -1.3
CSTF3-207ENST00000526480 CALM1P0DP23 149 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 CALM2P0DP24 149 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 CALM3P0DP25 149 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 CXCL12P48061 93 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 NUCB2P80303 420 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 SIM1P81133 766 aaPredicted RBP6.93□□□□□ -1.3
CSTF3-207ENST00000526480 HMGN5P82970 282 aaKnown RBP6.93□□□□□ -1.3
CSTF3-207ENST00000526480 CFHR1Q03591 330 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 CLLU1OSQ5K130 101 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 TAF2Q6P1X5 1199 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 NFXL1Q6ZNB6 911 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 TMTC3Q6ZXV5 915 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 FAM20CQ8IXL6 584 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 CELF2-AS1Q8N7Q2 184 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 FAM181AQ8N9Y4 354 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 IL31RAQ8NI17 732 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 PIP4K2CQ8TBX8 421 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 SYTL5Q8TDW5 730 aaPredicted RBP6.93□□□□□ -1.3
CSTF3-207ENST00000526480 CYB5D2Q8WUJ1 264 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 SMG7Q92540 1137 aaKnown RBP6.93□□□□□ -1.3
CSTF3-207ENST00000526480 STAMQ92783 540 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 TNPO1Q92973 898 aaKnown RBP6.93□□□□□ -1.3
CSTF3-207ENST00000526480 LOXL4Q96JB6 756 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 ADAM2Q99965 735 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 SSBP4Q9BWG4 385 aaPredicted RBP6.93□□□□□ -1.3
CSTF3-207ENST00000526480 FAM49AQ9H0Q0 323 aaPredicted RBP6.93□□□□□ -1.3
CSTF3-207ENST00000526480 ZSWIM4Q9H7M6 989 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 VPS45Q9NRW7 570 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 RGS18Q9NS28 235 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 MAD2L2Q9UI95 211 aa6.93□□□□□ -1.3
CSTF3-207ENST00000526480 PDZD2O15018 2839 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 TDRD15B5MCY1 1934 aaKnown RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 PCDH15Q96QU1 1955 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 B4DLN1 442 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 CYTH3O43739 400 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 EIF3JO75822 258 aaKnown RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 NFICP08651 508 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 ZSCAN22P10073 491 aaPredicted RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 PDHBP11177 359 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 TOP1P11387 765 aaKnown RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 MAP4P27816 1152 aaKnown RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 POLR2BP30876 1174 aaKnown RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 MRPL12P52815 198 aaKnown RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 BCAR1P56945 870 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 MAP7Q14244 749 aa6.92□□□□□ -1.3
CSTF3-207ENST00000526480 BMS1Q14692 1282 aaKnown RBP6.92□□□□□ -1.3
CSTF3-207ENST00000526480 DDR2Q16832 855 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms