RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 PCED1BQ96HM7 432 aa13.81□□□□□ -0.2
CTSB-209ENST00000525315 LPIN3Q9BQK8 851 aa13.81□□□□□ -0.2
CTSB-209ENST00000525315 IMPG2Q9BZV3 1241 aa13.81□□□□□ -0.2
CTSB-209ENST00000525315 DPEP3Q9H4B8 488 aa13.81□□□□□ -0.2
CTSB-209ENST00000525315 SORCS3Q9UPU3 1222 aa13.81□□□□□ -0.2
CTSB-209ENST00000525315 P4HA2O15460 535 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 GPR37L1O60883 481 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 FGF19O95750 216 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 CCDC192P0DO97 292 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 MYL4P12829 197 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 HMGA1P17096 107 aaKnown RBP13.8□□□□□ -0.2
CTSB-209ENST00000525315 CEBPBP17676 345 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 GPR15P49685 360 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 INCA1Q0VD86 236 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 VEPH1Q14D04 833 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 DDR2Q16832 855 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 DPCR1Q3MIW9 517 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 MDH1BQ5I0G3 518 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 WDR44Q5JSH3 913 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 VSTM1Q6UX27 236 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 SCARA5Q6ZMJ2 495 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 GAREM2Q75VX8 874 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 SLC44A3Q8N4M1 653 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 GIPC2Q8TF65 315 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 TATDN2Q93075 761 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 MCRS1Q96EZ8 462 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 TNIP3Q96KP6 325 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 SPATA17Q96L03 361 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 CEP295NLQ96MC4 621 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 B3GNT5Q9BYG0 378 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 NIF3L1Q9GZT8 377 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 FAM124BQ9H5Z6 455 aaPredicted RBP13.8□□□□□ -0.2
CTSB-209ENST00000525315 ZNF334Q9HCZ1 680 aaPredicted RBP13.8□□□□□ -0.2
CTSB-209ENST00000525315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.8□□□□□ -0.2
CTSB-209ENST00000525315 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
CTSB-209ENST00000525315 NUP210Q8TEM1 1887 aaPredicted RBP13.79□□□□□ -0.2
CTSB-209ENST00000525315 F11P03951 625 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 CSH1P0DML2 217 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 CSH2P0DML3 217 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 BDNFP23560 247 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 NDST1P52848 882 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 CYP27A1Q02318 531 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 KCNH2Q12809 1159 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 TDGQ13569 410 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 HTR4Q13639 388 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 PARM1Q6UWI2 310 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 PAQR9Q6ZVX9 377 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 UBALD2Q8IYN6 164 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 LMO3Q8TAP4 145 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 SHKBP1Q8TBC3 707 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 FAM200AQ8TCP9 573 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 GPR152Q8TDT2 470 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 WHAMMQ8TF30 809 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 RSAD2Q8WXG1 361 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 ING5Q8WYH8 240 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 MYRFLQ96LU7 910 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 C1QTNF1Q9BXJ1 281 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 GPR88Q9GZN0 384 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 IL21Q9HBE4 155 aa13.79□□□□□ -0.2
CTSB-209ENST00000525315 SLC38A8A6NNN8 435 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 CILPO75339 1184 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 NOL4O94818 638 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 CLSTN1O94985 981 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 GJA1P17302 382 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 TAF12Q16514 161 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 SDHAF4Q5VUM1 108 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 MTSS1LQ765P7 747 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 TMEM150AQ86TG1 271 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 ACOT1Q86TX2 421 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 SCN4BQ8IWT1 228 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 TTC39CQ8N584 583 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 EHBP1Q8NDI1 1231 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 FGF14Q92915 247 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 TRMT2BQ96GJ1 504 aaKnown RBP13.78□□□□□ -0.2
CTSB-209ENST00000525315 C8orf48Q96LL4 319 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 ZSWIM3Q96MP5 696 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 TWNKQ96RR1 684 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 RPP25Q9BUL9 199 aaKnown RBP13.78□□□□□ -0.2
CTSB-209ENST00000525315 THAP9Q9H5L6 903 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 C11orf16Q9NQ32 467 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 HMGXB4Q9UGU5 601 aa13.78□□□□□ -0.2
CTSB-209ENST00000525315 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.78□□□□□ -0.2
CTSB-209ENST00000525315 A0A1W2PRU2 124 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 SOBPA7XYQ1 873 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 CLDN5O00501 218 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 TRIM66O15016 1216 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 ECI2O75521 394 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 AFPP02771 609 aaKnown RBP13.77□□□□□ -0.21
CTSB-209ENST00000525315 GABRR2P28476 465 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 WEE1P30291 646 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 CDC25CP30307 473 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 GRIK1P39086 918 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 SIGLEC14Q08ET2 396 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 CETN1Q12798 172 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 MTMR3Q13615 1198 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 TEAD2Q15562 447 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 CCDC183Q5T5S1 534 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 TRIM67Q6ZTA4 783 aa13.77□□□□□ -0.21
CTSB-209ENST00000525315 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.21
CTSB-209ENST00000525315 NT5C1AQ9BXI3 368 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms