RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 PON2Q15165 354 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 CFAP221Q4G0U5 840 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 WDR44Q5JSH3 913 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 FAM26FQ5R3K3 315 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 FOXD4L5Q5VV16 416 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 EPM2AIP1Q7L775 607 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 LIMS2Q7Z4I7 341 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 WDR49Q8IV35 697 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 SYNPOQ8N3V7 929 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 FOXD4L4Q8WXT5 416 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 TRMT2BQ96GJ1 504 aaKnown RBP12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 FUBP3Q96I24 572 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 MYRFLQ96LU7 910 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 C7orf25Q9BPX7 421 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 FAM83CQ9BQN1 747 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 RAB23Q9ULC3 237 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 CCL26Q9Y258 94 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 CEP250Q9BV73 2442 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 PTPRJQ12913 1337 aa12.61□□□□□ -0.39
CTNNA1-237ENST00000523275 POLR2DO15514 142 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 TGFB1I1O43294 461 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 HCRTO43612 131 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 ATP2C2O75185 946 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 PAPSS2O95340 614 aaPredicted RBP12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 ZSCAN22P10073 491 aaPredicted RBP12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 SNRPFP62306 86 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 CCINQ13939 588 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 PUM1Q14671 1186 aaKnown RBP eCLIP12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 SNRNP35Q16560 246 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 CC2D1AQ6P1N0 951 aaPredicted RBP12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 FAM171BQ6P995 826 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 C4orf50Q6ZRC1 276 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 Q6ZS52 159 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 TRAPPC11Q7Z392 1133 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 SCN4BQ8IWT1 228 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 STKLD1Q8NE28 680 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 KIF9Q9HAQ2 790 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 MAGEF1Q9HAY2 307 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 AGPAT3Q9NRZ7 376 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 MAGEC2Q9UBF1 373 aaPredicted RBP12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 CACNA1AO00555 2505 aa12.6□□□□□ -0.39
CTNNA1-237ENST00000523275 TCHHQ07283 1943 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 CHURC1-FNTBB4DL54 471 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 K7ESF4 209 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 HSP90AA1P07900 732 aaKnown RBP12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 DLATP10515 647 aaKnown RBP12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 TNNI1P19237 187 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 LMO2P25791 158 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 MAGEA11P43364 429 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 ME1P48163 572 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 FNTBP49356 437 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 AMPD2Q01433 879 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 RUNX3Q13761 415 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 ZNF268Q14587 947 aaPredicted RBP12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 PDGFRLQ15198 375 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 MAPRE1Q15691 268 aaKnown RBP12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 CCDC142Q17RM4 750 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 FOXD4L6Q3SYB3 417 aaPredicted RBP12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 FOXD4L3Q6VB84 417 aaPredicted RBP12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 UNC13DQ70J99 1090 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 HS2ST1Q7LGA3 356 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 DGLUCYQ7Z3D6 616 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 RDH13Q8NBN7 331 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 SCFD1Q8WVM8 642 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 KBTBD7Q8WVZ9 684 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 FNBP1Q96RU3 617 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 CYP2S1Q96SQ9 504 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 MMS19Q96T76 1030 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 SYT15Q9BQS2 421 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 EBF3Q9H4W6 596 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 HPS4Q9NQG7 708 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 FAM13BQ9NYF5 915 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 GMEB2Q9UKD1 530 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 CDH9Q9ULB4 789 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 UBE4BO95155 1302 aa12.59□□□□□ -0.39
CTNNA1-237ENST00000523275 TRAV19A0A0A6YYK7 116 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 PVALEFA0A1B0GWK0 134 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 OTOL1A6NHN0 477 aaPredicted RBP12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 TRDMT1O14717 391 aaKnown RBP12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 CLIC2O15247 247 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 HRO43593 1189 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 F13A1P00488 732 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 CST3P01034 146 aaPredicted RBP12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 PDGFRBP09619 1106 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 USP17L7P0C7H9 530 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 SDHBP21912 280 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 WARSP23381 471 aaKnown RBP12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 HOXA6P31267 233 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 CNR2P34972 360 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 CYP2J2P51589 502 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 PSMC1P62191 440 aaKnown RBP12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 EHHADHQ08426 723 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 DMWDQ09019 674 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 GRSF1Q12849 480 aaKnown RBP eCLIP12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 SIM2Q14190 667 aaPredicted RBP12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 PSMD6Q15008 389 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 LPAL2Q16609 132 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 RSPO4Q2I0M5 234 aaPredicted RBP12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 TMEM196Q5HYL7 178 aa12.58□□□□□ -0.4
CTNNA1-237ENST00000523275 HEATR6Q6AI08 1181 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms