RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 THEM5Q8N1Q8 247 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 TMEM86AQ8N2M4 240 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 ACRBPQ8NEB7 543 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 SLC30A5Q8TAD4 765 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 LNX1Q8TBB1 728 aaPredicted RBP13.13□□□□□ -0.31
PABPC1-219ENST00000522387 CPA5Q8WXQ8 436 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 UBXN4Q92575 508 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 TGS1Q96RS0 853 aaKnown RBP13.13□□□□□ -0.31
PABPC1-219ENST00000522387 WDR24Q96S15 920 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 PCDHA11Q9Y5I1 949 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.13□□□□□ -0.31
PABPC1-219ENST00000522387 ZSCAN12O43309 604 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 URI1O94763 535 aaPredicted RBP13.13□□□□□ -0.31
PABPC1-219ENST00000522387 CYP11A1P05108 521 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 FERP16591 822 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 BMP8BP34820 402 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 OR1D2P34982 312 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 PPM1AP35813 382 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 ZNF132P52740 706 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 PSMD5Q16401 504 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 TTC9BQ8N6N2 239 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 ATAD1Q8NBU5 361 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 MNS1Q8NEH6 495 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 CCDC42Q96M95 316 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 PANX2Q96RD6 677 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 MED10Q9BTT4 135 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 EDEM3Q9BZQ6 932 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 ABI2Q9NYB9 513 aaPredicted RBP13.13□□□□□ -0.31
PABPC1-219ENST00000522387 TAS2R14Q9NYV8 317 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 NOCTQ9UK39 431 aaKnown RBP13.13□□□□□ -0.31
PABPC1-219ENST00000522387 TSPAN16Q9UKR8 245 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
PABPC1-219ENST00000522387 A0A087X0T9 212 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 TULP2O00295 520 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 SYN3O14994 580 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 PER2O15055 1255 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 AKR1B10O60218 316 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 SERPING1P05155 500 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 URODP06132 367 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 FAM228BP0C875 321 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 GLUD2P49448 558 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 LIMS2Q7Z4I7 341 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 DDX53Q86TM3 631 aaKnown RBP13.12□□□□□ -0.31
PABPC1-219ENST00000522387 FBXO22Q8NEZ5 403 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 GPR152Q8TDT2 470 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 IQCDQ96DY2 449 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 TNIP3Q96KP6 325 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 FAM81BQ96LP2 452 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 KCNK16Q96T55 309 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 PCDHB18PQ96TA0 734 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 MRPL17Q9NRX2 175 aaKnown RBP13.12□□□□□ -0.31
PABPC1-219ENST00000522387 DSEQ9UL01 958 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 M0QYV0 167 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 BEST1O76090 585 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 OAZ2O95190 189 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 CXCL14O95715 111 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 CHRNB2P17787 502 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 BDNFP23560 247 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 CACNA2D1P54289 1103 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 TSPY1Q01534 308 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 FMO1Q01740 532 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 IFRD2Q12894 506 aaPredicted RBP13.12□□□□□ -0.31
PABPC1-219ENST00000522387 ELAVL2Q12926 359 aaKnown RBP13.12□□□□□ -0.31
PABPC1-219ENST00000522387 SGO2Q562F6 1265 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 SDHAF4Q5VUM1 108 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 ZNF280DQ6N043 979 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 CYP26C1Q6V0L0 522 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 SPPL3Q8TCT6 385 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 DDX1Q92499 740 aaKnown RBP13.12□□□□□ -0.31
PABPC1-219ENST00000522387 TIFAQ96CG3 184 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 AGPAT1Q99943 283 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 ZNF518BQ9C0D4 1074 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 NUCKS1Q9H1E3 243 aaKnown RBP13.12□□□□□ -0.31
PABPC1-219ENST00000522387 CHST7Q9NS84 486 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
PABPC1-219ENST00000522387 CNTN6Q9UQ52 1028 aa13.12□□□□□ -0.31
PABPC1-219ENST00000522387 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.12□□□□□ -0.31
PABPC1-219ENST00000522387 TSC2P49815 1807 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 TADA3O75528 432 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 TYMPP19971 482 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 TNFAIP3P21580 790 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 CYP2F1P24903 491 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 PCSK1P29120 753 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 GNG11P61952 73 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 GPM6BQ13491 265 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 CAMK1Q14012 370 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 MEA1Q16626 185 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 GOLGA7BQ2TAP0 167 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 INTS6LQ5JSJ4 861 aaKnown RBP13.11□□□□□ -0.31
PABPC1-219ENST00000522387 RNF19BQ6ZMZ0 732 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 UNC93AQ86WB7 457 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 MYLPFQ96A32 169 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 CLSTN3Q9BQT9 956 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 ACBD6Q9BR61 282 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 CARD6Q9BX69 1037 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 TMEM30AQ9NV96 361 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 MUC3AQ02505 3323 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 DDX3XO00571 662 aaKnown RBP eCLIP13.11□□□□□ -0.31
PABPC1-219ENST00000522387 MICAL2O94851 1124 aa13.11□□□□□ -0.31
PABPC1-219ENST00000522387 RGS7P49802 495 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms