RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 LIMCH1Q9UPQ0 1083 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 POLHQ9Y253 713 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PCDHGA9Q9Y5G4 932 aaKnown RBP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PCDHGA8Q9Y5G5 932 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PCDHGA7Q9Y5G6 932 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PCDHGA6Q9Y5G7 932 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PCDHGA3Q9Y5H0 932 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 COL4A3BPQ9Y5P4 624 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 COX11Q9Y6N1 276 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 ITSN1Q15811 1721 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 TRPM3Q9HCF6 1732 aaPredicted RBP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 SLIT2O94813 1529 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 RTL1A6NKG5 1358 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 FLT4P35916 1363 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 SPATA31A5Q5VU36 1347 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 SPATA31A7Q8IWB4 1347 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 WDR17Q8IZU2 1322 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 CD1AP06126 327 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 FTH1P19P0C7X4 201 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 KCNA2P16389 499 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 SMARCA1P28370 1054 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 CYP2C19P33261 490 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 RARRES1P49788 294 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 RBM6P78332 1123 aaKnown RBP4.06□□□□□ -1.76
VPS13B-209ENST00000521559 TLE1Q04724 770 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 IL10RAQ13651 578 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 EIF4A2Q14240 407 aaKnown RBP4.06□□□□□ -1.76
VPS13B-209ENST00000521559 GEN1Q17RS7 908 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 TOM1L2Q6ZVM7 507 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 RD3Q7Z3Z2 195 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 PDSS2Q86YH6 399 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 TCP11L2Q8N4U5 519 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 DCBLD1Q8N8Z6 715 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 ACTRT2Q8TDY3 377 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 BRINP2Q9C0B6 783 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 SIK2Q9H0K1 926 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 CCDC8Q9H0W5 538 aaPredicted RBP4.06□□□□□ -1.76
VPS13B-209ENST00000521559 KIAA1586Q9HCI6 787 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 CDYLQ9Y232 598 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 NUDCQ9Y266 331 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 RGPD8O14715 1765 aaPredicted RBP4.06□□□□□ -1.76
VPS13B-209ENST00000521559 MYOM1P52179 1685 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 ALS2Q96Q42 1657 aa4.06□□□□□ -1.76
VPS13B-209ENST00000521559 COL22A1Q8NFW1 1626 aaPredicted RBP4.06□□□□□ -1.76
VPS13B-209ENST00000521559 NFAT5O94916 1531 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 BCL9LQ86UU0 1499 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 BLMP54132 1417 aaPredicted RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 SPATA31A1Q5TZJ5 1347 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 MON2Q7Z3U7 1717 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 CCDC195A0A1B0GUA6 201 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 CCDC78A2IDD5 438 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 E7ENX8 843 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 FZD9O00144 591 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 SLC16A6O15403 523 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 SNUPNO95149 360 aaKnown RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 SRGNP10124 158 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 FOLR3P41439 243 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 RECQLP46063 649 aaPredicted RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 CLK3P49761 638 aaKnown RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 ANXA11P50995 505 aaKnown RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 ZNF280AP59817 542 aaPredicted RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 IGBP1P78318 339 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 POU6F2P78424 691 aaPredicted RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 TAP2Q03519 686 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 DYRK1AQ13627 763 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 CCDC142Q17RM4 750 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 C3orf36Q3SXR2 165 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 PREPLQ4J6C6 727 aaPredicted RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 FBXO42Q6P3S6 717 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 GRASPQ7Z6J2 395 aaPredicted RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 ANKRD13AQ8IZ07 590 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 Q8NA96 180 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 C3orf20Q8ND61 904 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 SSH3Q8TE77 659 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 NSUN6Q8TEA1 469 aaKnown RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 RAB24Q969Q5 203 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 ZNF764Q96H86 408 aaPredicted RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 SMOQ99835 787 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 IMPG2Q9BZV3 1241 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 RSAD1Q9HA92 442 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 PCDH12Q9NPG4 1184 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 RLIMQ9NVW2 624 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 CFAP97Q9P2B7 532 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 SLC17A6Q9P2U8 582 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 THRAP3Q9Y2W1 955 aaKnown RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 NOP58Q9Y2X3 529 aaKnown RBP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 PCDHB1Q9Y5F3 818 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.05□□□□□ -1.76
VPS13B-209ENST00000521559 PIK3C2AO00443 1686 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 SHPRHQ149N8 1683 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 CAMTA1Q9Y6Y1 1673 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 NRKQ7Z2Y5 1582 aa4.05□□□□□ -1.76
VPS13B-209ENST00000521559 ATRNO75882 1429 aa4.04□□□□□ -1.76
VPS13B-209ENST00000521559 SMG6Q86US8 1419 aaKnown RBP4.04□□□□□ -1.76
VPS13B-209ENST00000521559 AKAP12Q02952 1782 aa4.04□□□□□ -1.76
VPS13B-209ENST00000521559 TOR1BO14657 336 aa4.04□□□□□ -1.76
VPS13B-209ENST00000521559 YY2O15391 372 aa4.04□□□□□ -1.76
VPS13B-209ENST00000521559 SOAT2O75908 522 aa4.04□□□□□ -1.76
VPS13B-209ENST00000521559 CHEK2O96017 543 aa4.04□□□□□ -1.76
VPS13B-209ENST00000521559 C1RP00736 705 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms