RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	KIAA1683	Q9H0B3	1180 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	USP44	Q9H0E7	712 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	ABHD16B	Q9H3Z7	469 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	FSCN3	Q9NQT6	498 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	KLHL14	Q9P2G3	628 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	HPSE	Q9Y251	543 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	URI1	O94763	535 aa	Predicted RBP	4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	CLTB	P09497	229 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	MTHFD1	P11586	935 aa	Known RBP	4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	ALOX12	P18054	663 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	ATP5J	P18859	108 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	CHRM3	P20309	590 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	GATA4	P43694	442 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	MAPKAPK2	P49137	400 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	RBM5	P52756	815 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	ITGA1	P56199	1179 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	VAMP2	P63027	116 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	ROR1	Q01973	937 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	DUSP8	Q13202	625 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	MSMP	Q1L6U9	139 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	KRT40	Q6A162	431 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	BRINP3	Q76B58	766 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	WFDC3	Q8IUB2	231 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	TEX11	Q8IYF3	940 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	RTKN2	Q8IZC4	609 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	SLC17A8	Q8NDX2	589 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	SMARCC2	Q8TAQ2	1214 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	GCDH	Q92947	438 aa	Predicted RBP	4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	MISP3	Q96FF7	219 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	TMEM209	Q96SK2	561 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	SLC25A32	Q9H2D1	315 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	TTYH1	Q9H313	450 aa	Predicted RBP	4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	TP63	Q9H3D4	680 aa	Predicted RBP	4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	SEPT11	Q9NVA2	429 aa	Known RBP	4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	USP40	Q9NVE5	1235 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	DTNA	Q9Y4J8	743 aa		4.07	□□□□□ -1.76
SREK1-208	ENST00000520580	CCDC196	A0A1B0GTZ2	297 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	hCG_1807616	A0A1W2PRN6	198 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	KIF28P	B7ZC32	967 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580		F5H0A9	414 aa	Predicted RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580		H3BNC9	293 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	RRP9	O43818	475 aa	Known RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	ANXA6	P08133	673 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	AR	P10275	920 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	POR	P16435	677 aa	Predicted RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	OAS2	P29728	719 aa	Known RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	PGM1	P36871	562 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	MAGEA10	P43363	369 aa	Predicted RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	PTTG1IP	P53801	180 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	POLE2	P56282	527 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	WNT3A	P56704	352 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	RNASE9	P60153	205 aa	Known RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	DLG4	P78352	724 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	MXRA7	P84157	204 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	GPS1	Q13098	491 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	GALNTL6	Q49A17	601 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	LRRC24	Q50LG9	513 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	SNX30	Q5VWJ9	437 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	MRNIP	Q6NTE8	343 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	ZNF365	Q70YC5	407 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	MED25	Q71SY5	747 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	RAB11FIP2	Q7L804	512 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	CXXC5	Q7LFL8	322 aa	Known RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	CPLX4	Q7Z7G2	160 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	CLEC14A	Q86T13	490 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	PLA2G15	Q8NCC3	412 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.06	□□□□□ -1.76	5e-7	■■□□□ 12.2
SREK1-208	ENST00000520580	IMPG2	Q9BZV3	1241 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	GSTO2	Q9H4Y5	243 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	NOD2	Q9HC29	1040 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	FBXO34	Q9NWN3	711 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	ADAMTS6	Q9UKP5	1117 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	TBX20	Q9UMR3	447 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	NAALADL1	Q9UQQ1	740 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	DERA	Q9Y315	318 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	CYP46A1	Q9Y6A2	500 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	VWA3A	A6NCI4	1184 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	GSC2	O15499	205 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	ZSCAN9	O15535	394 aa	Predicted RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	PTP4A3	O75365	173 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	SLC43A1	O75387	559 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	MAF	O75444	373 aa	Predicted RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	AGFG2	O95081	481 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	GLP2R	O95838	553 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	VIP	P01282	170 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	PROC	P04070	461 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	CYP2C8	P10632	490 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	CHM	P24386	653 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	SERPINA4	P29622	427 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	NTSR1	P30989	418 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	KRT17	Q04695	432 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	SP140	Q13342	867 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	SMAD4	Q13485	552 aa	Known RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	CTXN3	Q4LDR2	81 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	ZMYM1	Q5SVZ6	1142 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	FAM69A	Q5T7M9	428 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	RINL	Q6ZS11	566 aa		4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.06	□□□□□ -1.76	1e-7	■■□□□ 12.6
SREK1-208	ENST00000520580	H1FNT	Q75WM6	255 aa	Predicted RBP	4.06	□□□□□ -1.76
SREK1-208	ENST00000520580	ARMC8	Q8IUR7	673 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms