RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 KNOP1Q1ED39 458 aaKnown RBP27.13■■□□□ 1.93
VEGFA-220ENST00000519767 MON1AQ86VX9 555 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 NELFCDQ8IXH7 590 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 C12orf56Q8IXR9 622 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 MAB21L3Q8N8X9 362 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 GOLGA5Q8TBA6 731 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 RUBCNQ92622 972 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 SLC39A2Q9NP94 309 aa27.13■■□□□ 1.93
VEGFA-220ENST00000519767 MAGED2Q9UNF1 606 aaPredicted RBP27.13■■□□□ 1.93
VEGFA-220ENST00000519767 SLC38A8A6NNN8 435 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 SPECC1L-ADORA2AF8WAN1 911 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 CLIC2O15247 247 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 NOL4O94818 638 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 DLATP10515 647 aaKnown RBP27.12■■□□□ 1.93
VEGFA-220ENST00000519767 CYP2J2P51589 502 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 CCR3P51677 355 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 CYP24A1Q07973 514 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 CUL4BQ13620 913 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 DGKKQ5KSL6 1271 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 SUMF1Q8NBK3 374 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 CEP295NLQ96MC4 621 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 MMS19Q96T76 1030 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 TDP1Q9NUW8 608 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 OTOGLQ3ZCN5 2332 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 TCHHQ07283 1943 aa27.12■■□□□ 1.93
VEGFA-220ENST00000519767 WARSP23381 471 aaKnown RBP27.11■■□□□ 1.93
VEGFA-220ENST00000519767 CASP1P29466 404 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 GPR15P49685 360 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 PKP1Q13835 747 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 ITPRIPL2Q3MIP1 535 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 SPEM1Q8N4L4 309 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 SPRYD3Q8NCJ5 442 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 KBTBD7Q8WVZ9 684 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 CCDC127Q96BQ5 260 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 ZFYVE19Q96K21 471 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 CGRRF1Q99675 332 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 SYT15Q9BQS2 421 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 KIF9Q9HAQ2 790 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 GKN1Q9NS71 199 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 GTSE1Q9NYZ3 720 aa27.11■■□□□ 1.93
VEGFA-220ENST00000519767 MAGEC2Q9UBF1 373 aaPredicted RBP27.11■■□□□ 1.93
VEGFA-220ENST00000519767 LILRB5O75023 590 aa27.1■■□□□ 1.93
VEGFA-220ENST00000519767 CST3P01034 146 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-220ENST00000519767 CTHP32929 405 aa27.1■■□□□ 1.93
VEGFA-220ENST00000519767 PSMD2Q13200 908 aa27.1■■□□□ 1.93
VEGFA-220ENST00000519767 ZNF268Q14587 947 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-220ENST00000519767 SDHAF4Q5VUM1 108 aa27.1■■□□□ 1.93
VEGFA-220ENST00000519767 TXNDC8Q6A555 127 aa27.1■■□□□ 1.93
VEGFA-220ENST00000519767 VSTM1Q6UX27 236 aa27.1■■□□□ 1.93
VEGFA-220ENST00000519767 USP25Q9UHP3 1055 aa27.1■■□□□ 1.93
VEGFA-220ENST00000519767 GPR179Q6PRD1 2367 aa27.1■■□□□ 1.93
VEGFA-220ENST00000519767 TACC1O75410 805 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 CMA1P23946 247 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 LMO2P25791 158 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 GNL1P36915 607 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-220ENST00000519767 CXCL12P48061 93 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 TSSK4Q6SA08 328 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 SCN4BQ8IWT1 228 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 SYNPOQ8N3V7 929 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 FSIP1Q8NA03 581 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 USP13Q92995 863 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-220ENST00000519767 SPATA17Q96L03 361 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 HINFPQ9BQA5 517 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 FAM83CQ9BQN1 747 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 SMG9Q9H0W8 520 aaKnown RBP27.09■■□□□ 1.93
VEGFA-220ENST00000519767 SNX25Q9H3E2 840 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 SERTAD1Q9UHV2 236 aa27.09■■□□□ 1.93
VEGFA-220ENST00000519767 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.08■■□□□ 1.93
VEGFA-220ENST00000519767 EXOC3O60645 756 aa27.08■■□□□ 1.93
VEGFA-220ENST00000519767 ATP2C2O75185 946 aa27.08■■□□□ 1.93
VEGFA-220ENST00000519767 MYL1P05976 194 aa27.08■■□□□ 1.93
VEGFA-220ENST00000519767 PDGFRBP09619 1106 aa27.08■■□□□ 1.93
VEGFA-220ENST00000519767 SOX9P48436 509 aa27.08■■□□□ 1.93
VEGFA-220ENST00000519767 AP3M2P53677 418 aa27.08■■□□□ 1.93
VEGFA-220ENST00000519767 AMPD2Q01433 879 aa27.08■■□□□ 1.93
VEGFA-220ENST00000519767 TRPC3Q13507 836 aa27.08■■□□□ 1.93
VEGFA-220ENST00000519767 CC2D1AQ6P1N0 951 aaPredicted RBP27.08■■□□□ 1.93
VEGFA-220ENST00000519767 TTC8Q8TAM2 541 aa27.08■■□□□ 1.93
VEGFA-220ENST00000519767 PAGE5Q96GU1 130 aa27.08■■□□□ 1.93
VEGFA-220ENST00000519767 STAU1O95793 577 aaKnown RBP27.07■■□□□ 1.92
VEGFA-220ENST00000519767 ATICP31939 592 aa27.07■■□□□ 1.92
VEGFA-220ENST00000519767 WDR72Q3MJ13 1102 aa27.07■■□□□ 1.92
VEGFA-220ENST00000519767 MYCBPAPQ8TBZ2 947 aa27.07■■□□□ 1.92
VEGFA-220ENST00000519767 TMEM174Q8WUU8 243 aa27.07■■□□□ 1.92
VEGFA-220ENST00000519767 EPC1Q9H2F5 836 aa27.07■■□□□ 1.92
VEGFA-220ENST00000519767 EHD2Q9NZN4 543 aa27.07■■□□□ 1.92
VEGFA-220ENST00000519767 FANCMQ8IYD8 2048 aa27.07■■□□□ 1.92
VEGFA-220ENST00000519767 TICRRQ7Z2Z1 1910 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 HCRTO43612 131 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 ACTN4O43707 911 aaKnown RBP27.06■■□□□ 1.92
VEGFA-220ENST00000519767 TDGF1P13385 188 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 GRIK1P39086 918 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 TNNC1P63316 161 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 FOXK2Q01167 660 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 TNK2Q07912 1038 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 RUNX3Q13761 415 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 TXNDC11Q6PKC3 985 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 ZNF516Q92618 1163 aa27.06■■□□□ 1.92
VEGFA-220ENST00000519767 SECISBP2LQ93073 1101 aaKnown RBP27.06■■□□□ 1.92
VEGFA-220ENST00000519767 SYAP1Q96A49 352 aaPredicted RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms