RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ARHGEF37A1IGU5 675 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 PRRG1O14668 218 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 HCRTO43612 131 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 PHACTR2O75167 634 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 ZMYND10O75800 440 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 NOL4O94818 638 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 OAZ2O95190 189 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 LCA5LO95447 670 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 SEC24AO95486 1093 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 STAU1O95793 577 aaKnown RBP8.1□□□□□ -1.11
SDCBP-206ENST00000519115 C4BPAP04003 597 aaKnown RBP8.1□□□□□ -1.11
SDCBP-206ENST00000519115 CYP11A1P05108 521 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 ATICP31939 592 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 MTHFRP42898 656 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 MXI1P50539 228 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 MYL6P60660 151 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 KRT83P78385 493 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 CCZ1BP86790 482 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 CCZ1P86791 482 aaPredicted RBP8.1□□□□□ -1.11
SDCBP-206ENST00000519115 ADCY1Q08828 1119 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 MYO1EQ12965 1108 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 CCDC142Q17RM4 750 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 SGSM1Q2NKQ1 1148 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 ZACNQ401N2 412 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 PPM1LQ5SGD2 360 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 ATAT1Q5SQI0 421 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 C1orf220Q5T0J3 134 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 TCERG1LQ5VWI1 586 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 TDRD10Q5VZ19 366 aaKnown RBP8.1□□□□□ -1.11
SDCBP-206ENST00000519115 TRIM65Q6PJ69 517 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 RNF19BQ6ZMZ0 732 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 CACNA2D4Q7Z3S7 1137 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 GPR149Q86SP6 731 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 METTL23Q86XA0 190 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 TMEM139Q8IV31 216 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 ADHFE1Q8IWW8 467 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 PDCL2Q8N4E4 241 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 TTC9BQ8N6N2 239 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 CMASQ8NFW8 434 aaPredicted RBP8.1□□□□□ -1.11
SDCBP-206ENST00000519115 OR10T2Q8NGX3 314 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 BAP1Q92560 729 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 RPGRIP1Q96KN7 1286 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 CALR3Q96L12 384 aaKnown RBP8.1□□□□□ -1.11
SDCBP-206ENST00000519115 RIPOR3Q96MK2 946 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 RTP3Q9BQQ7 232 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 KCNF1Q9H3M0 494 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 MMRN2Q9H8L6 949 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 VRTNQ9H8Y1 702 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 PIDD1Q9HB75 910 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 LUC7LQ9NQ29 371 aaKnown RBP8.1□□□□□ -1.11
SDCBP-206ENST00000519115 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.1□□□□□ -1.112e-6■■■■■ 96.1
SDCBP-206ENST00000519115 RAB20Q9NX57 234 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 DPP7Q9UHL4 492 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 METRNQ9UJH8 293 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 DSEQ9UL01 958 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 POLIQ9UNA4 740 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.1□□□□□ -1.114e-6■□□□□ 10.9
SDCBP-206ENST00000519115 OBSL1O75147 1896 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 SPTBN5Q9NRC6 3674 aaKnown RBP8.1□□□□□ -1.11
SDCBP-206ENST00000519115 GREB1Q4ZG55 1949 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 OR6C75A6NL08 312 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 HUS1O60921 280 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 ABLIM3O94929 683 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 VNN1O95497 513 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 VNN2O95498 520 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 CST3P01034 146 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-206ENST00000519115 SERPING1P05155 500 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 FERP16591 822 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 TBXAS1P24557 533 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-206ENST00000519115 ACAT1P24752 427 aaKnown RBP8.09□□□□□ -1.11
SDCBP-206ENST00000519115 ELF1P32519 619 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 CYLC1P35663 651 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-206ENST00000519115 PIK3CAP42336 1068 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 GCLMP48507 274 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 JAM2P57087 298 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 BPIFB4P59827 614 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 NTHL1P78549 312 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 TRPC3Q13507 836 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 SLC39A12Q504Y0 691 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 WDR44Q5JSH3 913 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 IER5LQ5T953 404 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 PPP1R2P3Q6NXS1 205 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 SCARA5Q6ZMJ2 495 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 CCDC149Q6ZUS6 474 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 SV2AQ7L0J3 742 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 OSTM1Q86WC4 334 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 ADGRF2Q8IZF7 708 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 GJD3Q8N144 294 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 ATAD1Q8NBU5 361 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 ZNF461Q8TAF7 563 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 HDAC7Q8WUI4 952 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 PCMTD1Q96MG8 357 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-206ENST00000519115 NECTIN4Q96NY8 510 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 MMS19Q96T76 1030 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 PHF7Q9BWX1 381 aaPredicted RBP8.09□□□□□ -1.11
SDCBP-206ENST00000519115 PRKD2Q9BZL6 878 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 XYLT2Q9H1B5 865 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 GANQ9H2C0 597 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 CYP4F11Q9HBI6 524 aa8.09□□□□□ -1.11
SDCBP-206ENST00000519115 HCFC1R1Q9NWW0 138 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms