RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 MAN1C1Q9NR34 630 aa3.59□□□□□ -1.83
PCM1-208ENST00000518877 DUSP22Q9NRW4 184 aa3.59□□□□□ -1.83
PCM1-208ENST00000518877 RLIMQ9NVW2 624 aa3.59□□□□□ -1.83
PCM1-208ENST00000518877 CCNL1Q9UK58 526 aaPredicted RBP3.59□□□□□ -1.83
PCM1-208ENST00000518877 CFAP20Q9Y6A4 193 aaKnown RBP3.59□□□□□ -1.83
PCM1-208ENST00000518877 SLC16A3O15427 465 aaKnown RBP3.58□□□□□ -1.84
PCM1-208ENST00000518877 TLR5O60602 858 aa3.58□□□□□ -1.84
PCM1-208ENST00000518877 KIF20AO95235 890 aa3.58□□□□□ -1.84
PCM1-208ENST00000518877 LIPAP38571 399 aa3.58□□□□□ -1.84
PCM1-208ENST00000518877 MAVSQ7Z434 540 aa3.58□□□□□ -1.84
PCM1-208ENST00000518877 NECAB2Q7Z6G3 386 aa3.58□□□□□ -1.84
PCM1-208ENST00000518877 TTC7BQ86TV6 843 aa3.58□□□□□ -1.84
PCM1-208ENST00000518877 DTX2Q86UW9 622 aa3.58□□□□□ -1.84
PCM1-208ENST00000518877 CUL5Q93034 780 aa3.58□□□□□ -1.84
PCM1-208ENST00000518877 DAZAP1Q96EP5 407 aaKnown RBP3.58□□□□□ -1.84
PCM1-208ENST00000518877 RITA1Q96K30 269 aa3.58□□□□□ -1.84
PCM1-208ENST00000518877 SIK2Q9H0K1 926 aa3.58□□□□□ -1.84
PCM1-208ENST00000518877 GNL3LQ9NVN8 582 aaKnown RBP3.58□□□□□ -1.84
PCM1-208ENST00000518877 CFAP97Q9P2B7 532 aa3.58□□□□□ -1.84
PCM1-208ENST00000518877 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 LRRC14BA6NHZ5 514 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 ALPLP05186 524 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 IL6RP08887 468 aaPredicted RBP3.57□□□□□ -1.84
PCM1-208ENST00000518877 ATP5F1P24539 256 aaPredicted RBP3.57□□□□□ -1.84
PCM1-208ENST00000518877 PRDX5P30044 214 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 GCLCP48506 637 aaPredicted RBP3.57□□□□□ -1.84
PCM1-208ENST00000518877 KCNJ5P48544 419 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 FXR1P51114 621 aaKnown RBP eCLIP3.57□□□□□ -1.843e-10■■■□□ 16.1
PCM1-208ENST00000518877 TTC3P53804 2025 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 KRT85P78386 507 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 BOP1Q14137 746 aaKnown RBP3.57□□□□□ -1.84
PCM1-208ENST00000518877 ZNF268Q14587 947 aaPredicted RBP3.57□□□□□ -1.84
PCM1-208ENST00000518877 KIF22Q14807 665 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 RBMS2Q15434 407 aaKnown RBP3.57□□□□□ -1.84
PCM1-208ENST00000518877 SYDE2Q5VT97 1194 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 DLK2Q6UY11 383 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 PPP1R32Q7Z5V6 425 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 FAM90A1Q86YD7 464 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 C16orf52Q8NHV5 167 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 NELL2Q99435 816 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 C1orf43Q9BWL3 253 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 MCM8Q9UJA3 840 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 ADAMTS5Q9UNA0 930 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 PRKAB1Q9Y478 270 aa3.57□□□□□ -1.84
PCM1-208ENST00000518877 POC1B-GALNT4F8VUJ3 575 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 ADAM10O14672 748 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 DSCR3O14972 297 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 XPOTO43592 962 aaKnown RBP3.56□□□□□ -1.84
PCM1-208ENST00000518877 EXOC3O60645 756 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 USP1O94782 785 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 CLSTN1O94985 981 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 OAZ2O95190 189 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 RPLP2P05387 115 aaKnown RBP3.56□□□□□ -1.84
PCM1-208ENST00000518877 FESP07332 822 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 MYBL2P10244 700 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 RARBP10826 455 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 SMARCA1P28370 1054 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 PHKA1P46020 1223 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 THBS3P49746 956 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 SEMA3AQ14563 771 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 ODF1Q14990 250 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 ICE2Q659A1 982 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 FCRL6Q6DN72 434 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 SFRP4Q6FHJ7 346 aaPredicted RBP3.56□□□□□ -1.84
PCM1-208ENST00000518877 TMEM108Q6UXF1 575 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 SERPINA13PQ6UXR4 307 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 PARS2Q7L3T8 475 aaKnown RBP3.56□□□□□ -1.84
PCM1-208ENST00000518877 USP37Q86T82 979 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 GALNT4Q8N4A0 578 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 FSD1LQ9BXM9 530 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 CCDC8Q9H0W5 538 aaPredicted RBP3.56□□□□□ -1.84
PCM1-208ENST00000518877 FOXP1Q9H334 677 aaPredicted RBP3.56□□□□□ -1.84
PCM1-208ENST00000518877 TRHDEQ9UKU6 1024 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 SH2B3Q9UQQ2 575 aa3.56□□□□□ -1.84
PCM1-208ENST00000518877 NOTCH4Q99466 2003 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 CD8B2A6NJW9 211 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 UBE2Q2LH0YL09 131 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 H7C1Q1 480 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 GABRDO14764 452 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 FTH1P19P0C7X4 201 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 CYP2A6P11509 494 aaPredicted RBP3.55□□□□□ -1.84
PCM1-208ENST00000518877 PIK3CGP48736 1102 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 ADKP55263 362 aaKnown RBP3.55□□□□□ -1.84
PCM1-208ENST00000518877 GPSM2P81274 684 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 SP2Q02086 613 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 TWIST1Q15672 202 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 ABCB5Q2M3G0 1257 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 UAP1L1Q3KQV9 507 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 EGFLAMQ63HQ2 1017 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.55□□□□□ -1.84
PCM1-208ENST00000518877 C3orf20Q8ND61 904 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 XAGE5Q8WWM1 108 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 VCPIP1Q96JH7 1222 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 LYZL4Q96KX0 146 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 TINAGL1Q9GZM7 467 aaPredicted RBP3.55□□□□□ -1.84
PCM1-208ENST00000518877 TMX1Q9H3N1 280 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 GLOD4Q9HC38 313 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 SERTAD3Q9UJW9 196 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 PROCRQ9UNN8 238 aa3.55□□□□□ -1.84
PCM1-208ENST00000518877 SCAF8Q9UPN6 1271 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms