RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 TMEM30AQ9NV96 361 aa13.37□□□□□ -0.27
IGHV3-6-201ENST00000518407 ZDHHC7Q9NXF8 308 aa13.37□□□□□ -0.27
IGHV3-6-201ENST00000518407 ABI2Q9NYB9 513 aaPredicted RBP13.37□□□□□ -0.27
IGHV3-6-201ENST00000518407 IFNKQ9P0W0 207 aa13.37□□□□□ -0.27
IGHV3-6-201ENST00000518407 DPP7Q9UHL4 492 aa13.37□□□□□ -0.27
IGHV3-6-201ENST00000518407 DNAJC12Q9UKB3 198 aa13.37□□□□□ -0.27
IGHV3-6-201ENST00000518407 DAAM1Q9Y4D1 1078 aa13.37□□□□□ -0.27
IGHV3-6-201ENST00000518407 YIPF1Q9Y548 306 aa13.37□□□□□ -0.27
IGHV3-6-201ENST00000518407 PCDHB5Q9Y5E4 795 aa13.37□□□□□ -0.27
IGHV3-6-201ENST00000518407 TCF20Q9UGU0 1960 aaKnown RBP13.37□□□□□ -0.27
IGHV3-6-201ENST00000518407 UNC80Q8N2C7 3258 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 AP5Z1O43299 807 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 RFPL2O75678 378 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 HAPLN1P10915 354 aaPredicted RBP13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 CCDC130P13994 396 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 HOXB8P17481 243 aaPredicted RBP13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 ATF6P18850 670 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 MAGEA11P43364 429 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 CACNA2D1P54289 1103 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 UBASH3AP57075 661 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 JAM2P57087 298 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 DUSP4Q13115 394 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 LIN9Q5TKA1 542 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 SARM1Q6SZW1 724 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 TMEM270Q6UE05 265 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 C4orf50Q6ZRC1 276 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 CCDC149Q6ZUS6 474 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 FAM35AQ86V20 835 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 FUKQ8N0W3 1084 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 C12orf76Q8N812 135 aaPredicted RBP13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 C12orf29Q8N999 325 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 RBBP8NLQ8NC74 664 aaPredicted RBP13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 SMRP1Q8NCR6 262 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 ANP32EQ9BTT0 268 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 XPO4Q9C0E2 1151 aaKnown RBP13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 CYP4F11Q9HBI6 524 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 PRDM6Q9NQX0 595 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 FAM207AQ9NSI2 230 aaPredicted RBP13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 CEP72Q9P209 647 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 PCDHB4Q9Y5E5 795 aa13.36□□□□□ -0.27
IGHV3-6-201ENST00000518407 CLDN5O00501 218 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 PRRG1O14668 218 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 SOAT2O75908 522 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 PAEPP09466 180 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 HNRNPA1P09651 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 CYP2F1P24903 491 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 ELF1P32519 619 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 SKIV2LQ15477 1246 aaKnown RBP13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 ARHGAP44Q17R89 818 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 PPM1LQ5SGD2 360 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 PPP1R26Q5T8A7 1209 aaPredicted RBP13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 ARHGAP17Q68EM7 881 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 SPATA2LQ8IUW3 424 aaPredicted RBP13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 HLA-CQ95604 372 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 HNRNPABQ99729 332 aaKnown RBP13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 ZSWIM1Q9BR11 485 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 ZNF518BQ9C0D4 1074 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 TTYH3Q9C0H2 523 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 FAM49BQ9NUQ9 324 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 COG5Q9UP83 839 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 SLC27A5Q9Y2P5 690 aa13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 KIF26AQ9ULI4 1882 aaPredicted RBP13.35□□□□□ -0.27
IGHV3-6-201ENST00000518407 CCDC195A0A1B0GUA6 201 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 F8VZ95 297 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 H3BQ06 376 aaPredicted RBP13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 CALCAP01258 141 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 PNMA6AP0CW24 399 aaPredicted RBP13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 KCNA5P22460 613 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 BDNFP23560 247 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 GPR15P49685 360 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 POLR2FP61218 127 aaKnown RBP13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 CYP27A1Q02318 531 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 TWF1Q12792 350 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 RAPGEF1Q13905 1077 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 DRAP1Q14919 205 aaPredicted RBP13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 MGAT5BQ3V5L5 792 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 RARS2Q5T160 578 aaKnown RBP13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 ELMSAN1Q6PJG2 1045 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 VSTM1Q6UX27 236 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 GPR149Q86SP6 731 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 FAM71AQ8IYT1 594 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 ZMIZ2Q8NF64 920 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 NEK11Q8NG66 645 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 SLC2A14Q8TDB8 520 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 TFAP2BQ92481 460 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 SUSD6Q92537 303 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 CYFIP2Q96F07 1278 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 SEPT5Q99719 369 aaPredicted RBP13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 STK33Q9BYT3 514 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 PRKD2Q9BZL6 878 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 CD207Q9UJ71 328 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 CDH22Q9UJ99 828 aa13.34□□□□□ -0.27
IGHV3-6-201ENST00000518407 GRXCR2A6NFK2 248 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 O00370 1275 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 FOXN3O00409 490 aaPredicted RBP13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 CCL16O15467 120 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 VDRP11473 427 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 KRT5P13647 590 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 CLCN1P35523 988 aa13.33□□□□□ -0.28
IGHV3-6-201ENST00000518407 TUFMP49411 452 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms