RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 PDHBP11177 359 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 LRRC36Q1X8D7 754 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 C16orf62Q7Z3J2 963 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 ADGRF2Q8IZF7 708 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 SENP6Q9GZR1 1112 aaPredicted RBP11.46□□□□□ -0.58
TRIM41-209ENST00000515834 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.46□□□□□ -0.58
TRIM41-209ENST00000515834 FBXO28Q9NVF7 368 aa11.46□□□□□ -0.58
TRIM41-209ENST00000515834 CHORDC1Q9UHD1 332 aaPredicted RBP11.46□□□□□ -0.58
TRIM41-209ENST00000515834 UNC13AQ9UPW8 1703 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 ANKRD65E5RJM6 399 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 RAP1GAPP47736 663 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 RHOAP61586 193 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 MTSS1LQ765P7 747 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 OTOAQ7RTW8 1153 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 GAS2L3Q86XJ1 694 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 ZNF669Q96BR6 464 aaPredicted RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 PNMA5Q96PV4 448 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 STK33Q9BYT3 514 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 RNF208Q9H0X6 261 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 ATXN3LQ9H3M9 355 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 ZFYVE1Q9HBF4 777 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 KDM6BO15054 1643 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 GRID2IPA4D2P6 1211 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 MYO1CO00159 1063 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 USP13Q92995 863 aaPredicted RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 SKA1Q96BD8 255 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 RERGLQ9H628 205 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 PAPOLBQ9NRJ5 636 aaKnown RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 PADI4Q9UM07 663 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 NDUFS2O75306 463 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 AMHP03971 560 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 THP07101 528 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 SPRP35270 261 aaPredicted RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 DOK6Q6PKX4 331 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 ITIH5Q86UX2 942 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 FAM71DQ8N9W8 422 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 MED8Q96G25 268 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 FAR2Q96K12 515 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 WWP1Q9H0M0 922 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 DPP7Q9UHL4 492 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 NEU2Q9Y3R4 380 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 N6AMT1Q9Y5N5 214 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 ATP8B1O43520 1251 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 RPL10AP62906 217 aaKnown RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 YWHAZP63104 245 aaKnown RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 ALX1Q15699 326 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 LONRF1Q17RB8 773 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 C16orf86Q6ZW13 317 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 SYTL1Q8IYJ3 562 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 C4orf33Q8N1A6 199 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 IFRD1O00458 451 aaPredicted RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 VEGFAP15692 232 aaPredicted RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 YWHAQP27348 245 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 CUL4AQ13619 759 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 FNDC3BQ53EP0 1204 aaKnown RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 DENND5BQ6ZUT9 1274 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 COMMD2Q86X83 199 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 CCDC60Q8IWA6 550 aaPredicted RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 ARMC2Q8NEN0 867 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 NIF3L1Q9GZT8 377 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 RIC8BQ9NVN3 520 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 UTP6Q9NYH9 597 aaKnown RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 NOP53Q9NZM5 478 aaKnown RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 NCKAP1Q9Y2A7 1128 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 SOAT2O75908 522 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 NUDT14O95848 222 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 PTK7Q13308 1070 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 TRMT11Q7Z4G4 463 aaKnown RBP11.45□□□□□ -0.58
TRIM41-209ENST00000515834 ERO1BQ86YB8 467 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 SIRT2Q8IXJ6 389 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 PGLYRP2Q96PD5 576 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 TMEM245Q9H330 911 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 MSRAQ9UJ68 235 aa11.45□□□□□ -0.58
TRIM41-209ENST00000515834 ARHGAP31Q2M1Z3 1444 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 RASSF10A6NK89 507 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 PDHXO00330 501 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 ZBTB39O15060 712 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 EIF3DO15371 548 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 DDNO94850 711 aaPredicted RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 CPSF4O95639 269 aaKnown RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 ENO2P09104 434 aaPredicted RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 PGM1P36871 562 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 TRIM32Q13049 653 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 DHX34Q14147 1143 aaKnown RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 PDIA5Q14554 519 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 FAXCQ5TGI0 409 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 TRIM51Q9BSJ1 452 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 ETNK1Q9HBU6 452 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 KRCC1Q9NPI7 259 aaPredicted RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 NSMCE4AQ9NXX6 385 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 CDK12Q9NYV4 1490 aaPredicted RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 PDZK1P1A8MUH7 402 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 VPS26AO75436 327 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 ALDH9A1P49189 494 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 SF3B3Q15393 1217 aaKnown RBP11.44□□□□□ -0.58
TRIM41-209ENST00000515834 NAPEPLDQ6IQ20 393 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 LRRC8BQ6P9F7 803 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 MAGI2Q86UL8 1455 aa11.44□□□□□ -0.58
TRIM41-209ENST00000515834 NFICP08651 508 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms