RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 TMC7Q7Z402 723 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 KIF2BQ8N4N8 673 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 HES6Q96HZ4 224 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 XPO6Q96QU8 1125 aaKnown RBP16.69■□□□□ 0.26
TRIM41-207ENST00000515223 TASP1Q9H6P5 420 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 CACNA2D2Q9NY47 1150 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 KLK14Q9P0G3 267 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.69■□□□□ 0.26
TRIM41-207ENST00000515223 CFAP73A6NFT4 308 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 SPAG6O75602 509 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 YY1P25490 414 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 UGT3A1Q6NUS8 523 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 DEFB132Q7Z7B7 95 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 SAMD3Q8N6K7 520 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 RFWD2Q8NHY2 731 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 BRD8Q9H0E9 1235 aa16.69■□□□□ 0.26
TRIM41-207ENST00000515223 XPO7Q9UIA9 1087 aaKnown RBP16.69■□□□□ 0.26
TRIM41-207ENST00000515223 GTF2H1P32780 548 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 LINC00523Q86TU6 105 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 APOL5Q9BWW9 433 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 WDCPQ9H6R7 721 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 DDIT4Q9NX09 232 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 DSEQ9UL01 958 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 AP1G2O75843 785 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 ERFP50548 548 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 ZC2HC1CQ53FD0 456 aaPredicted RBP16.68■□□□□ 0.26
TRIM41-207ENST00000515223 CAPRIN2Q6IMN6 1127 aaKnown RBP16.68■□□□□ 0.26
TRIM41-207ENST00000515223 SPATA18Q8TC71 538 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 ZNF556Q9HAH1 456 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 MAN1C1Q9NR34 630 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 OGTO15294 1046 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 ZC3H11AO75152 810 aaKnown RBP eCLIP16.68■□□□□ 0.261e-9■■□□□ 13.7
TRIM41-207ENST00000515223 PSMA3P25788 255 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 AVPR1AP37288 418 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 EPHB3P54753 998 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 HDAC4P56524 1084 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 CUL3Q13618 768 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 BOLA3Q53S33 107 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 USP38Q8NB14 1042 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 BHMTQ93088 406 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 EMILIN2Q9BXX0 1053 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 NDEL1Q9GZM8 345 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 TRABDQ9H4I3 376 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRIM41-207ENST00000515223 A0A1W2PQJ5 194 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 SYNCRIPO60506 623 aaKnown RBP16.68■□□□□ 0.26
TRIM41-207ENST00000515223 RAG1P15918 1043 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 ITIH2P19823 946 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 ACO1P21399 889 aaKnown RBP16.68■□□□□ 0.26
TRIM41-207ENST00000515223 HSD17B3P37058 310 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 NCALDP61601 193 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 DAB2P98082 770 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 NAB2Q15742 525 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 PPCSQ9HAB8 311 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 CHST12Q9NRB3 414 aa16.68■□□□□ 0.26
TRIM41-207ENST00000515223 SMG5Q9UPR3 1016 aaKnown RBP16.68■□□□□ 0.26
TRIM41-207ENST00000515223 NCKAP1LP55160 1127 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 CTXN3Q4LDR2 81 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 ERAP2Q6P179 960 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 OPTNQ96CV9 577 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 DTNAQ9Y4J8 743 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 DDHD2O94830 711 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 SLC9A1P19634 815 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 MZF1P28698 734 aaPredicted RBP16.67■□□□□ 0.26
TRIM41-207ENST00000515223 HSPA9P38646 679 aaKnown RBP16.67■□□□□ 0.26
TRIM41-207ENST00000515223 PTGER2P43116 358 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 PPP4CP60510 307 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 RBM15Q96T37 977 aaKnown RBP eCLIP16.67■□□□□ 0.263e-6■□□□□ 8.5
TRIM41-207ENST00000515223 FOXP3Q9BZS1 431 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 RIC8BQ9NVN3 520 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 DMGDHQ9UI17 866 aaKnown RBP16.67■□□□□ 0.26
TRIM41-207ENST00000515223 NKRFO15226 690 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRIM41-207ENST00000515223 RHOBTB1O94844 696 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 GARTP22102 1010 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 SLC26A2P50443 739 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 BYSLQ13895 437 aaKnown RBP16.67■□□□□ 0.26
TRIM41-207ENST00000515223 DMC1Q14565 340 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 SPATA21Q7Z572 469 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 VIRMAQ69YN4 1812 aaKnown RBP16.67■□□□□ 0.26
TRIM41-207ENST00000515223 C2orf81A6NN90 581 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 F9P00740 461 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 PACS2Q86VP3 889 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 NT5DC4Q86YG4 428 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 BTN2A2Q8WVV5 523 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 OSBPL8Q9BZF1 889 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 NMRK1Q9NWW6 199 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 KIAA1257Q9ULG3 409 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 DYRK3O43781 588 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 TBX2Q13207 712 aaPredicted RBP16.67■□□□□ 0.26
TRIM41-207ENST00000515223 SYCP2LQ5T4T6 812 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 B4GALNT2Q8NHY0 566 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 H2AFY2Q9P0M6 372 aaPredicted RBP16.67■□□□□ 0.26
TRIM41-207ENST00000515223 ITSN1Q15811 1721 aa16.67■□□□□ 0.26
TRIM41-207ENST00000515223 MANSC4A6NHS7 340 aaPredicted RBP16.66■□□□□ 0.26
TRIM41-207ENST00000515223 UBXN8O00124 270 aa16.66■□□□□ 0.26
TRIM41-207ENST00000515223 PHF2O75151 1096 aa16.66■□□□□ 0.26
TRIM41-207ENST00000515223 APOA4P06727 396 aa16.66■□□□□ 0.26
TRIM41-207ENST00000515223 MYL2P10916 166 aa16.66■□□□□ 0.26
TRIM41-207ENST00000515223 CDKAL1Q5VV42 579 aa16.66■□□□□ 0.26
TRIM41-207ENST00000515223 ZNF280DQ6N043 979 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms