RNA–Protein interactions for RNA: ENST00000514627.5

YIPF3-217, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-217ENST00000514627 RSPO4Q2I0M5 234 aaPredicted RBP13.43□□□□□ -0.26
YIPF3-217ENST00000514627 CC2D1AQ6P1N0 951 aaPredicted RBP13.43□□□□□ -0.26
YIPF3-217ENST00000514627 CNNM4Q6P4Q7 775 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 LIMS2Q7Z4I7 341 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 ADGRF2Q8IZF7 708 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 IQUBQ8NA54 791 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 TTC8Q8TAM2 541 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 USP13Q92995 863 aaPredicted RBP13.43□□□□□ -0.26
YIPF3-217ENST00000514627 EXOC4Q96A65 974 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 PKMYT1Q99640 499 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 FGFBP2Q9BYJ0 223 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 TRIM9Q9C026 710 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 SMG9Q9H0W8 520 aaKnown RBP13.43□□□□□ -0.26
YIPF3-217ENST00000514627 RBM12Q9NTZ6 932 aaKnown RBP13.43□□□□□ -0.26
YIPF3-217ENST00000514627 SIX4Q9UIU6 781 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 GTF3C4Q9UKN8 822 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 ZDHHC9Q9Y397 364 aa13.43□□□□□ -0.26
YIPF3-217ENST00000514627 TRDMT1O14717 391 aaKnown RBP13.42□□□□□ -0.26
YIPF3-217ENST00000514627 FOXD2O60548 495 aaPredicted RBP13.42□□□□□ -0.26
YIPF3-217ENST00000514627 ATG13O75143 517 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 YEATS4O95619 227 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 FAM163BP0C2L3 166 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 TGM1P22735 817 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 GRSF1Q12849 480 aaKnown RBP eCLIP13.42□□□□□ -0.26
YIPF3-217ENST00000514627 SIM2Q14190 667 aaPredicted RBP13.42□□□□□ -0.26
YIPF3-217ENST00000514627 MAPRE1Q15691 268 aaKnown RBP13.42□□□□□ -0.26
YIPF3-217ENST00000514627 E2F4Q16254 413 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 SOWAHAQ2M3V2 549 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 WDR44Q5JSH3 913 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 TXNDC8Q6A555 127 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 FAM171BQ6P995 826 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 C4orf50Q6ZRC1 276 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 Q6ZS52 159 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 SPATA2LQ8IUW3 424 aaPredicted RBP13.42□□□□□ -0.26
YIPF3-217ENST00000514627 WDR49Q8IV35 697 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 ZNF507Q8TCN5 953 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 NOC3LQ8WTT2 800 aaKnown RBP13.42□□□□□ -0.26
YIPF3-217ENST00000514627 HPDLQ96IR7 371 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 MTMR12Q9C0I1 747 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 CDH9Q9ULB4 789 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 USP18Q9UMW8 372 aa13.42□□□□□ -0.26
YIPF3-217ENST00000514627 MAGED2Q9UNF1 606 aaPredicted RBP13.42□□□□□ -0.26
YIPF3-217ENST00000514627 TICRRQ7Z2Z1 1910 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 CCDC163A0A0D9SF12 145 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 CHURC1-FNTBB4DL54 471 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 HRO43593 1189 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 CUTAO60888 179 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 USP17L7P0C7H9 530 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 ACAT1P24752 427 aaKnown RBP13.41□□□□□ -0.26
YIPF3-217ENST00000514627 FNTBP49356 437 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 NUCB2P80303 420 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 FAM160A1Q05DH4 1040 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 TMEM196Q5HYL7 178 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 VSTM1Q6UX27 236 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 EPM2AIP1Q7L775 607 aaPredicted RBP13.41□□□□□ -0.26
YIPF3-217ENST00000514627 OSTM1Q86WC4 334 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 CBWD2Q8IUF1 395 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 FSIP1Q8NA03 581 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 OR5B17Q8NGF7 314 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 SPATA17Q96L03 361 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 MAGEF1Q9HAY2 307 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 HPS4Q9NQG7 708 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 HSPBP1Q9NZL4 362 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 EHD2Q9NZN4 543 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 CCL26Q9Y258 94 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 DNAH14Q0VDD8 3507 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 TSC2P49815 1807 aa13.41□□□□□ -0.26
YIPF3-217ENST00000514627 SPTBN2O15020 2390 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 EPG5Q9HCE0 2579 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 TRAV19A0A0A6YYK7 116 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 PFKLP17858 780 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 DRD1P21728 446 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 HOXD13P35453 343 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 GPR15P49685 360 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 PDE6CP51160 858 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 ASIC1P78348 528 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 FBXO43Q4G163 708 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 FAM26FQ5R3K3 315 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 SDHAF4Q5VUM1 108 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 SCARA3Q6AZY7 606 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 PRR23BQ6ZRT6 265 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 TRAPPC11Q7Z392 1133 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 WDR5BQ86VZ2 330 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 SCN4BQ8IWT1 228 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 GLIS3Q8NEA6 775 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 KBTBD7Q8WVZ9 684 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 DHX58Q96C10 678 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 C7orf25Q9BPX7 421 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 SYT15Q9BQS2 421 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 RTKNQ9BST9 563 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 EBF3Q9H4W6 596 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 PARD6AQ9NPB6 346 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 CGNQ9P2M7 1197 aaKnown RBP13.4□□□□□ -0.26
YIPF3-217ENST00000514627 TFIP11Q9UBB9 837 aaKnown RBP13.4□□□□□ -0.26
YIPF3-217ENST00000514627 MAGEC2Q9UBF1 373 aaPredicted RBP13.4□□□□□ -0.26
YIPF3-217ENST00000514627 CDV3Q9UKY7 258 aaKnown RBP13.4□□□□□ -0.26
YIPF3-217ENST00000514627 ANK1P16157 1881 aa13.4□□□□□ -0.26
YIPF3-217ENST00000514627 UBE4BO95155 1302 aa13.39□□□□□ -0.27
YIPF3-217ENST00000514627 PTPRJQ12913 1337 aa13.39□□□□□ -0.27
YIPF3-217ENST00000514627 MED19A0JLT2 244 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms