RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 SPATA2LQ8IUW3 424 aaPredicted RBP11.78□□□□□ -0.52
SKP2-207ENST00000513263 ADGRF2Q8IZF7 708 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 GPD1LQ8N335 351 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 PDCL2Q8N4E4 241 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 MAB21L3Q8N8X9 362 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 GAB3Q8WWW8 586 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 INTS4Q96HW7 963 aaKnown RBP11.78□□□□□ -0.52
SKP2-207ENST00000513263 EPSTI1Q96J88 318 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 ZFYVE19Q96K21 471 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 AGAP1Q9UPQ3 857 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 PCDHGA5Q9Y5G8 931 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 UBE4BO95155 1302 aa11.78□□□□□ -0.52
SKP2-207ENST00000513263 PI4KAP42356 2102 aa11.77□□□□□ -0.52
SKP2-207ENST00000513263 CHURC1-FNTBB4DL54 471 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 TRIM66O15016 1216 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 EIF3DO15371 548 aaKnown RBP eCLIP11.77□□□□□ -0.53
SKP2-207ENST00000513263 RPP40O75818 363 aaKnown RBP11.77□□□□□ -0.53
SKP2-207ENST00000513263 CD2BP2O95400 341 aaKnown RBP11.77□□□□□ -0.53
SKP2-207ENST00000513263 F11P03951 625 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 KRT19P08727 400 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 CCDC192P0DO97 292 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 HMGA1P17096 107 aaKnown RBP11.77□□□□□ -0.53
SKP2-207ENST00000513263 TGM1P22735 817 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 ANXA13P27216 316 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 IFNAR2P48551 515 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 FNTBP49356 437 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 SNRPFP62306 86 aaKnown RBP11.77□□□□□ -0.53
SKP2-207ENST00000513263 GRIN1Q05586 938 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 KCNB1Q14721 858 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 MTF1Q14872 753 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 IL31Q6EBC2 164 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 C1orf127Q8N9H9 656 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 C12orf50Q8NA57 414 aaPredicted RBP11.77□□□□□ -0.53
SKP2-207ENST00000513263 GIPC2Q8TF65 315 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 LRRC15Q8TF66 581 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 OSCP1Q8WVF1 389 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 USP13Q92995 863 aaPredicted RBP11.77□□□□□ -0.53
SKP2-207ENST00000513263 DNAJC19Q96DA6 116 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 SLC46A2Q9BY10 475 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 MAGEF1Q9HAY2 307 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 GKN1Q9NS71 199 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 RBM12Q9NTZ6 932 aaKnown RBP11.77□□□□□ -0.53
SKP2-207ENST00000513263 L1RE1Q9UN81 338 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 MAGED2Q9UNF1 606 aaPredicted RBP11.77□□□□□ -0.53
SKP2-207ENST00000513263 SNX9Q9Y5X1 595 aa11.77□□□□□ -0.53
SKP2-207ENST00000513263 MYO18AQ92614 2054 aaKnown RBP11.77□□□□□ -0.53
SKP2-207ENST00000513263 MYMKA6NI61 221 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 ZNF233A6NK53 670 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 TISP43B9A030 160 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 EPN2O95208 641 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 NFATC1O95644 943 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 ADRB1P08588 477 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 TNK2Q07912 1038 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 USP4Q13107 963 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 ELF2Q15723 593 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 LPAL2Q16609 132 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 DUOXA2Q1HG44 320 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 LRRTM3Q86VH5 581 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 WDR49Q8IV35 697 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 FAM160A2Q8N612 972 aaPredicted RBP11.76□□□□□ -0.53
SKP2-207ENST00000513263 CSGALNACT2Q8N6G5 542 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 SAAL1Q96ER3 474 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 SPATA17Q96L03 361 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 LRRC3BQ96PB8 259 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 P2RY13Q9BPV8 354 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 PI4K2AQ9BTU6 479 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 MTMR12Q9C0I1 747 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 EBF3Q9H4W6 596 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 PARD6AQ9NPB6 346 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 PANK4Q9NVE7 773 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 CGNQ9P2M7 1197 aaKnown RBP11.76□□□□□ -0.53
SKP2-207ENST00000513263 CDH9Q9ULB4 789 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 CLIC4Q9Y696 253 aa11.76□□□□□ -0.53
SKP2-207ENST00000513263 USP24Q9UPU5 2620 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.75□□□□□ -0.53
SKP2-207ENST00000513263 SLC9A3R1O14745 358 aaPredicted RBP11.75□□□□□ -0.53
SKP2-207ENST00000513263 GABRDO14764 452 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 HRO43593 1189 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 RNF40O75150 1001 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 APBB3O95704 486 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 FAM163BP0C2L3 166 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 SLC39A14Q15043 492 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 ZNF77Q15935 545 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 AASDHQ4L235 1098 aaPredicted RBP11.75□□□□□ -0.53
SKP2-207ENST00000513263 HEATR6Q6AI08 1181 aaKnown RBP11.75□□□□□ -0.53
SKP2-207ENST00000513263 DENND5BQ6ZUT9 1274 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 SYT13Q7L8C5 426 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 TMEM150AQ86TG1 271 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 DDX42Q86XP3 938 aaKnown RBP eCLIP11.75□□□□□ -0.53
SKP2-207ENST00000513263 TMEM130Q8N3G9 435 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 CD101Q93033 1021 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 ZC3H10Q96K80 434 aaKnown RBP11.75□□□□□ -0.53
SKP2-207ENST00000513263 SYT15Q9BQS2 421 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 TRPC7Q9HCX4 862 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 HPS4Q9NQG7 708 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 INTS13Q9NVM9 706 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 DUS2Q9NX74 493 aaKnown RBP11.75□□□□□ -0.53
SKP2-207ENST00000513263 TBC1D7Q9P0N9 293 aa11.75□□□□□ -0.53
SKP2-207ENST00000513263 MAGEC2Q9UBF1 373 aaPredicted RBP11.75□□□□□ -0.53
SKP2-207ENST00000513263 EBF1Q9UH73 591 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms