RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	TRAPPC11	Q7Z392	1133 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	OSTM1	Q86WC4	334 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GPIHBP1	Q8IV16	184 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	ADGRF2	Q8IZF7	708 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	KBTBD7	Q8WVZ9	684 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	KIF9	Q9HAQ2	790 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TDP1	Q9NUW8	608 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	GTSE1	Q9NYZ3	720 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	CDH9	Q9ULB4	789 aa		13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.46	□□□□□ -0.25
UBE2D3-231	ENST00000513098	TACC1	O75410	805 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	STAU1	O95793	577 aa	Known RBP	13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	WARS	P23381	471 aa	Known RBP	13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ACAT1	P24752	427 aa	Known RBP	13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	LMO2	P25791	158 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	AVPR1A	P37288	418 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ID4	P47928	161 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CXCL12	P48061	93 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CCIN	Q13939	588 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PSMD6	Q15008	389 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	MAPRE1	Q15691	268 aa	Known RBP	13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	DDR2	Q16832	855 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ITPRIPL2	Q3MIP1	535 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	WDR44	Q5JSH3	913 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TXNDC11	Q6PKC3	985 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	VSTM1	Q6UX27	236 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	C4orf50	Q6ZRC1	276 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	HS2ST1	Q7LGA3	356 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	HSCB	Q8IWL3	235 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	GPR161	Q8N6U8	529 aa	Known RBP	13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	MAB21L3	Q8N8X9	362 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	XXYLT1	Q8NBI6	393 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	MRPS31	Q92665	395 aa	Known RBP	13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	USP13	Q92995	863 aa	Predicted RBP	13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ZFYVE19	Q96K21	471 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	FAM84A	Q96KN4	292 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SPATA17	Q96L03	361 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	GKN1	Q9NS71	199 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	FAM13B	Q9NYF5	915 aa		13.45	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SLC38A8	A6NNN8	435 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CST3	P01034	146 aa	Predicted RBP	13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SLFN14	P0C7P3	912 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PFKL	P17858	780 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ME1	P48163	572 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SOX9	P48436	509 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	GPR15	P49685	360 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CDR1	P51861	262 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CLDN10	P78369	228 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CYP24A1	Q07973	514 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	KNOP1	Q1ED39	458 aa	Known RBP	13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TXNDC8	Q6A555	127 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TSSK4	Q6SA08	328 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	GZF1	Q9H116	711 aa	Predicted RBP	13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CCL26	Q9Y258	94 aa		13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.44	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ZNF638	Q14966	1978 aa	Known RBP	13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TRDMT1	O14717	391 aa	Known RBP	13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TADA3	O75528	432 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	MYL1	P05976	194 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	HSP90AA1	P07900	732 aa	Known RBP	13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TCF3	P15923	654 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ATIC	P31939	592 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CNR2	P34972	360 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	GNL1	P36915	607 aa	Predicted RBP	13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	AMPD2	Q01433	879 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TNK2	Q07912	1038 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PSMD2	Q13200	908 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CUL4B	Q13620	913 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	RUNX3	Q13761	415 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TMEM196	Q5HYL7	178 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	DCLK2	Q8N568	766 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	KIAA1958	Q8N8K9	716 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	RDH13	Q8NBN7	331 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	GOLGA5	Q8TBA6	731 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	MYCBPAP	Q8TBZ2	947 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	NOC3L	Q8WTT2	800 aa	Known RBP	13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ZNF516	Q92618	1163 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	FNBP1	Q96RU3	617 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CGRRF1	Q99675	332 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	SMG9	Q9H0W8	520 aa	Known RBP	13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	VRTN	Q9H8Y1	702 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CRTAC1	Q9NQ79	661 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	HPS4	Q9NQG7	708 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	GREB1	Q4ZG55	1949 aa		13.43	□□□□□ -0.26
UBE2D3-231	ENST00000513098	OBSL1	O75147	1896 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	OTOL1	A6NHN0	477 aa	Predicted RBP	13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098		K7ESF4	209 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CLIC2	O15247	247 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	HCRT	O43612	131 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	KLRC4	O43908	158 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	ATP2C2	O75185	946 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	DLAT	P10515	647 aa	Known RBP	13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TNNI1	P19237	187 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	TGM1	P22735	817 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	CMA1	P23946	247 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	PPP3CC	P48454	512 aa		13.42	□□□□□ -0.26
UBE2D3-231	ENST00000513098	AP3M2	P53677	418 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms