RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 GTPBP1O00178 669 aaKnown RBP9.27□□□□□ -0.92
VCAN-208ENST00000512590 FGAP02671 866 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 ACADLP28330 430 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 TYK2P29597 1187 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 GGCXP38435 758 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 PNPLA4P41247 253 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 RANBP1P43487 201 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 ATAT1Q5SQI0 421 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 FAXCQ5TGI0 409 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 MYO1HQ8N1T3 1032 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 XXYLT1Q8NBI6 393 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 ATP6V1C2Q8NEY4 427 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 C11orf70Q9BRQ4 267 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 EDARQ9UNE0 448 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 AURKCQ9UQB9 309 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 PCDHA10Q9Y5I2 948 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.27□□□□□ -0.92
VCAN-208ENST00000512590 IRS2Q9Y4H2 1338 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 ASXL2Q76L83 1435 aa9.27□□□□□ -0.92
VCAN-208ENST00000512590 SCAF11Q99590 1463 aaKnown RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 GSAPA4D1B5 854 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 H3BM21 787 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 M0R3G1 203 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 TBC1D4O60343 1298 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 STAU1O95793 577 aaKnown RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 TAF6P49848 677 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 TMED1Q13445 227 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 SETMARQ53H47 684 aaPredicted RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 PPP2R2DQ66LE6 453 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 TCEAL6Q6IPX3 200 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 FOXR2Q6PJQ5 311 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 ANO5Q75V66 913 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 PLD3Q8IV08 490 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 IPMKQ8NFU5 416 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 SLC16A10Q8TF71 515 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 SOCS4Q8WXH5 440 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 RACGAP1Q9H0H5 632 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 CNOT8Q9UFF9 292 aaKnown RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 PCDHB3Q9Y5E6 796 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 ZNF536O15090 1300 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 SLC12A8A0AV02 714 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 PRPF3O43395 683 aaKnown RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 B3GAT3O94766 335 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 PDE8BO95263 885 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 CPA1P15085 419 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 DSG3P32926 999 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 ABRQ12979 859 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 AASDHQ4L235 1098 aaPredicted RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 C16orf59Q7L2K0 433 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 ZNF558Q96NG5 402 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 RGS18Q9NS28 235 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 HERC5Q9UII4 1024 aaKnown RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 LRCH1Q9Y2L9 728 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 MCIDASD6RGH6 385 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 STRNO43815 780 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 MSCO60682 206 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 SRP72O76094 671 aaKnown RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 SNX4O95219 450 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 TCP1P17987 556 aaKnown RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 HOXA7P31268 230 aaPredicted RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 ERVK-9P63128 1117 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 KIF23Q02241 960 aaPredicted RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 SPIDRQ14159 915 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 INPP5AQ14642 412 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 MEA1Q16626 185 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 CCDC184Q52MB2 194 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 STRIP1Q5VSL9 837 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 PPM1NQ8N819 430 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 SHDQ96IW2 340 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 SMYD3Q9H7B4 428 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 RIMKLBQ9ULI2 386 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 ERVK-11Q9UQG0 969 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 ARAP1Q96P48 1450 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 A0A0J9YVX5 310 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 RHPN2P1A8MT19 583 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 TFPIP10646 304 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 MAPKAPK2P49137 400 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 NFIAQ12857 509 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 IFT88Q13099 833 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 STX5Q13190 355 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 PTK6Q13882 451 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 KBTBD12Q3ZCT8 623 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 MAP1SQ66K74 1059 aaPredicted RBP9.27□□□□□ -0.93
VCAN-208ENST00000512590 LYSMD3Q7Z3D4 306 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 CPA6Q8N4T0 437 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 ABHD5Q8WTS1 349 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 RADILQ96JH8 1075 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 POLR1BQ9H9Y6 1135 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 ING3Q9NXR8 418 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 SYNPO2Q9UMS6 1093 aa9.27□□□□□ -0.93
VCAN-208ENST00000512590 RNF103O00237 685 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 SPAG7O75391 227 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 S100A5P33763 92 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CLK2P49760 499 aaKnown RBP9.26□□□□□ -0.93
VCAN-208ENST00000512590 TAS2R50P59544 299 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 RHAGQ02094 409 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 FOXM1Q08050 763 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 CUL3Q13618 768 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 KLHL38Q2WGJ6 581 aa9.26□□□□□ -0.93
VCAN-208ENST00000512590 C8orf34Q49A92 452 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms