RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 OPRD1P41143 372 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 NCKAP1LP55160 1127 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 FAM193AP78312 1265 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 AMPD2Q01433 879 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 MESP2Q0VG99 397 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 CCDC142Q17RM4 750 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 ZC2HC1CQ53FD0 456 aaPredicted RBP20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 C2orf27AQ580R0 203 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 TRIM61Q5EBN2 209 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 TMEM92Q6UXU6 159 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 CCDC33Q8N5R6 958 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 TTC16Q8NEE8 873 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 OLIG1Q8TAK6 271 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 BICD1Q96G01 975 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 C8orf76Q96K31 380 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 CNOT6LQ96LI5 555 aaKnown RBP20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 FNBP1Q96RU3 617 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 PYM1Q9BRP8 204 aaKnown RBP20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 PI4K2AQ9BTU6 479 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 FSCN3Q9NQT6 498 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 EVLQ9UI08 416 aaPredicted RBP20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 CPSF3Q9UKF6 684 aaKnown RBP20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 CEP192Q8TEP8 1941 aa20.54■□□□□ 0.88
HMGCS1-206ENST00000511774 XPOTO43592 962 aaKnown RBP20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 PTGER3P43115 390 aa20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 MAPK8P45983 427 aa20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 SMTNP53814 917 aa20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 ARSHQ5FYA8 562 aa20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 KRT79Q5XKE5 535 aa20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 ARMCX6Q7L4S7 300 aa20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 MRPS31Q92665 395 aaKnown RBP20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 PLIN2Q99541 437 aa20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 TIPINQ9BVW5 301 aa20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 MBD1Q9UIS9 605 aaPredicted RBP20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.53■□□□□ 0.88
HMGCS1-206ENST00000511774 PCDH15Q96QU1 1955 aa20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 A0A0B4J269 797 aa20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 ENGP17813 658 aa20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 LIG4P49917 911 aa20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 SLC12A3P55017 1021 aa20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 ZXDBP98169 803 aa20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 FAM160A1Q05DH4 1040 aa20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 ZRSR1Q15695 479 aaKnown RBP20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 DDR2Q16832 855 aa20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 SCARA3Q6AZY7 606 aa20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 EFCAB13Q8IY85 973 aa20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 LRRC15Q8TF66 581 aa20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 C2orf15Q8WU43 125 aaKnown RBP20.52■□□□□ 0.88
HMGCS1-206ENST00000511774 ATXN2Q99700 1313 aaKnown RBP20.52■□□□□ 0.87
HMGCS1-206ENST00000511774 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 TISP43B9A030 160 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 PIGRP01833 764 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 IFNAR2P48551 515 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 TRAPPC10P48553 1259 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 ANAPC15P60006 121 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 SIM1P81133 766 aaPredicted RBP20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 SEMA3BQ13214 749 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 TMEM132DQ14C87 1099 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 TMEFF1Q8IYR6 380 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 CHCHD4Q8N4Q1 142 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 SYT2Q8N9I0 419 aaPredicted RBP20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 FBXO18Q8NFZ0 1043 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 KCNN1Q92952 543 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 ATP2A3Q93084 1043 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 TSPAN18Q96SJ8 248 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 TRPC7Q9HCX4 862 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 GCNT4Q9P109 453 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 MMP17Q9ULZ9 603 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 PCDHB5Q9Y5E4 795 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 PLXNB3Q9ULL4 1909 aa20.51■□□□□ 0.87
HMGCS1-206ENST00000511774 C2orf78A6NCI8 922 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 HNRNPDLO14979 420 aaKnown RBP20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 PRPF40AO75400 957 aaKnown RBP20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 NOL4O94818 638 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 CSH1P0DML2 217 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 CSH2P0DML3 217 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 CYP2F1P24903 491 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 P2RY2P41231 377 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 CRY1Q16526 586 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 SOWAHCQ53LP3 525 aaPredicted RBP20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 HYIQ5T013 277 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 C19orf48Q6RUI8 117 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 C11orf74Q86VG3 221 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 TTC30AQ86WT1 665 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 THEM5Q8N1Q8 247 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 ARL14EPQ8N8R7 260 aaPredicted RBP20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 SH3RF2Q8TEC5 729 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 MSTO1Q9BUK6 570 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 CCSER1Q9C0I3 900 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 IKZF4Q9H2S9 585 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 DSEQ9UL01 958 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 STK24Q9Y6E0 443 aa20.5■□□□□ 0.87
HMGCS1-206ENST00000511774 ANKRD63C9JTQ0 380 aa20.49■□□□□ 0.87
HMGCS1-206ENST00000511774 PAX3P23760 479 aa20.49■□□□□ 0.87
HMGCS1-206ENST00000511774 ACOT2P49753 483 aa20.49■□□□□ 0.87
HMGCS1-206ENST00000511774 TAF6P49848 677 aa20.49■□□□□ 0.87
HMGCS1-206ENST00000511774 SMARCB1Q12824 385 aa20.49■□□□□ 0.87
HMGCS1-206ENST00000511774 KYAT1Q16773 422 aa20.49■□□□□ 0.87
HMGCS1-206ENST00000511774 METTL23Q86XA0 190 aa20.49■□□□□ 0.87
HMGCS1-206ENST00000511774 PROSER1Q86XN7 944 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms