RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.72	□□□□□ -0.53
PTCD2-208	ENST00000510676	MAB21L3	Q8N8X9	362 aa		11.72	□□□□□ -0.53
PTCD2-208	ENST00000510676	RHBDD1	Q8TEB9	315 aa		11.72	□□□□□ -0.53
PTCD2-208	ENST00000510676	DNASE2B	Q8WZ79	361 aa		11.72	□□□□□ -0.53
PTCD2-208	ENST00000510676	TMEM176A	Q96HP8	235 aa		11.72	□□□□□ -0.53
PTCD2-208	ENST00000510676	LPIN3	Q9BQK8	851 aa		11.72	□□□□□ -0.53
PTCD2-208	ENST00000510676	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.72	□□□□□ -0.53
PTCD2-208	ENST00000510676	BRPF3	Q9ULD4	1205 aa		11.72	□□□□□ -0.53
PTCD2-208	ENST00000510676	FNDC3A	Q9Y2H6	1198 aa	Known RBP	11.72	□□□□□ -0.53
PTCD2-208	ENST00000510676	ZFHX3	Q15911	3703 aa		11.72	□□□□□ -0.53
PTCD2-208	ENST00000510676	LRRIQ4	A6NIV6	560 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	F11	P03951	625 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	MCM4	P33991	863 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	NLRP12	P59046	1061 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	FAM160A1	Q05DH4	1040 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	KCNH2	Q12809	1159 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	USP4	Q13107	963 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	SYCP2L	Q5T4T6	812 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	DHRS13	Q6UX07	377 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	ERICH1	Q86X53	443 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	ZBTB8OS	Q8IWT0	167 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	EFCAB13	Q8IY85	973 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	SPATA18	Q8TC71	538 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	FAM20A	Q96MK3	541 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	C22orf23	Q9BZE7	217 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	GAREM1	Q9H706	876 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	ANKEF1	Q9NU02	776 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	CALCOCO1	Q9P1Z2	691 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	BTBD3	Q9Y2F9	522 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	WNT6	Q9Y6F9	365 aa		11.71	□□□□□ -0.53
PTCD2-208	ENST00000510676	DENND4C	Q5VZ89	1909 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676		A0A1B0GTW7	788 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	GOLGA8CP	A6NN73	597 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	ZNF217	O75362	1048 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	SLITRK3	O94933	977 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	GABRG2	P18507	467 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	MARCKS	P29966	332 aa	Predicted RBP	11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	GRM5	P41594	1212 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	IFNAR2	P48551	515 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	TUFM	P49411	452 aa	Known RBP	11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	AARS	P49588	968 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	UCN	P55089	124 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	TMPRSS3	P57727	454 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	BNC1	Q01954	994 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	GSE1	Q14687	1217 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	VEPH1	Q14D04	833 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	WDR45B	Q5MNZ6	344 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	TXNDC8	Q6A555	127 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	IL27RA	Q6UWB1	636 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	PRICKLE2	Q7Z3G6	844 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	SFTPA1	Q8IWL2	248 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	RUFY2	Q8WXA3	655 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	FOXJ1	Q92949	421 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	ARID3A	Q99856	593 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	C2orf40	Q9H1Z8	148 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	DDX25	Q9UHL0	483 aa	Known RBP	11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	USP20	Q9Y2K6	914 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	RBM8A	Q9Y5S9	174 aa	Known RBP	11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	AK5	Q9Y6K8	562 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	NBAS	A2RRP1	2371 aa		11.7	□□□□□ -0.54
PTCD2-208	ENST00000510676	SLC37A4	O43826	429 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	NFATC1	O95644	943 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	TCF3	P15923	654 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	HMGA1	P17096	107 aa	Known RBP	11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	NMT1	P30419	496 aa	Known RBP	11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	HNF1B	P35680	557 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	EIF2D	P41214	584 aa	Known RBP	11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	MATK	P42679	507 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	MESP2	Q0VG99	397 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	CTTN	Q14247	550 aa	Known RBP	11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	HLA-B	Q31612	363 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	PGBD3	Q8N328	593 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	CCDC148	Q8NFR7	591 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	SPIRE2	Q8WWL2	714 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	C18orf25	Q96B23	403 aa	Predicted RBP	11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	DYDC2	Q96IM9	177 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	CD248	Q9HCU0	757 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	CNTN3	Q9P232	1028 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	PCDHGA1	Q9Y5H4	931 aa		11.69	□□□□□ -0.54
PTCD2-208	ENST00000510676	NF1	P21359	2839 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	MYO18A	Q92614	2054 aa	Known RBP	11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	GOLGA8A	A7E2F4	631 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	GOLGA8B	A8MQT2	603 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676		M0R2N6	131 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	SGSM2	O43147	1006 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	PRPF3	O43395	683 aa	Known RBP	11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	CDK4	P11802	303 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	JUP	P14923	745 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	ADD1	P35611	737 aa	Known RBP	11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	GRK6	P43250	576 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	RARRES1	P49788	294 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	YARS	P54577	528 aa	Known RBP	11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	CCDC173	Q0VFZ6	552 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	SUZ12	Q15022	739 aa	Known RBP	11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	TMEM132A	Q24JP5	1023 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	TBC1D25	Q3MII6	688 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	NT5DC1	Q5TFE4	455 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	PPP4R3A	Q6IN85	833 aa		11.68	□□□□□ -0.54
PTCD2-208	ENST00000510676	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms