RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 GPIHBP1Q8IV16 184 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 HPS1Q92902 700 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 SP110Q9HB58 689 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 CCNB1IP1Q9NPC3 277 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 UBP1Q9NZI7 540 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 TRDMT1O14717 391 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 CD3EAPO15446 510 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 SLC29A2Q14542 456 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 PKN3Q6P5Z2 889 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 SLC26A11Q86WA9 606 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 DAGLBQ8NCG7 672 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 LENG1Q96BZ8 264 aaPredicted RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 KLHL20Q9Y2M5 609 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 M0QYV0 167 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 WARSP23381 471 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 GSTT1P30711 240 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 Q4G0T1 1027 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 TRIQKQ629K1 86 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 MOXD1Q6UVY6 613 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 PUS7LQ9H0K6 701 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 G3BP2Q9UN86 482 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 ATP6V1C1P21283 382 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 CMTR1Q8N1G2 835 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 RYBPQ8N488 228 aaPredicted RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 GALNT4Q8N4A0 578 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 NCKIPSDQ9NZQ3 722 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 NR2C2P49116 596 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 SH2D3CQ8N5H7 860 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 EXD1Q8NHP7 514 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 TLR2O60603 784 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 ANXA9O76027 345 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 IMPDH2P12268 514 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 GYG1P46976 350 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 GLMNQ92990 594 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 CRNNQ9UBG3 495 aaPredicted RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 DNAJB4Q9UDY4 337 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 BTNL10A8MVZ5 291 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 CYP4Z1Q86W10 505 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 ATPAF2Q8N5M1 289 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 RBM46Q8TBY0 533 aaKnown RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 SLC10A4Q96EP9 437 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 UTYO14607 1347 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 ATP6V1B1P15313 513 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 NPR3P17342 541 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 GALCP54803 685 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 DDR2Q16832 855 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 CCDC142Q17RM4 750 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 TTC23LQ6PF05 361 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 ABI1Q8IZP0 508 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 PARD3BQ8TEW8 1205 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 TMEM161AQ9NX61 479 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 USE1Q9NZ43 259 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 EIF3LQ9Y262 564 aaKnown RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 PIK3R1P27986 724 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 MAGEA8P43361 318 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 DPYSQ14117 519 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 MEI1Q5TIA1 1274 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 NANOGNBQ7Z5D8 188 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 STARD8Q92502 1023 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 LRRC7Q96NW7 1537 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 KCNN4O15554 427 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 MTTPP55157 894 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 C6orf10Q5SRN2 563 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 ECSITQ9BQ95 431 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 CROCCQ5TZA2 2017 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 UBTFL6P0CB48 400 aaPredicted RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 TCF3P15923 654 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 DRG2P55039 364 aaKnown RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 TPI1P60174 286 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 POU5F1BQ06416 359 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 SCRN3Q0VDG4 424 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 SNX30Q5VWJ9 437 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 ANKRD40Q6AI12 368 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 BICRALQ6AI39 1079 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 NAPEPLDQ6IQ20 393 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 CABLES1Q8TDN4 633 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 DIS3LQ8TF46 1054 aaKnown RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 C1orf54Q8WWF1 131 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 CASKIN2Q8WXE0 1202 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 PGBD4Q96DM1 585 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 GANQ9H2C0 597 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 ARHGEF38Q9NXL2 777 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 NXF1Q9UBU9 619 aaKnown RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 H7C1W4 665 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 LCA5LO95447 670 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 RALAP11233 206 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 ENO3P13929 434 aaPredicted RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 PRIM2P49643 509 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 TCP10Q12799 353 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 KCNT1Q5JUK3 1230 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 SAMD3Q8N6K7 520 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 EZH1Q92800 747 aaPredicted RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 TMEM8AQ9HCN3 771 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 ATP9AO75110 1047 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 MARK2Q7KZI7 788 aaKnown RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 SLC13A5Q86YT5 568 aaPredicted RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 LRRC34Q8IZ02 419 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 NSUN6Q8TEA1 469 aaKnown RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 GDPD5Q8WTR4 605 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 MPP4Q96JB8 637 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms