RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 SERPINB6P35237 376 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 PDE1CQ14123 709 aaPredicted RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 PSMD6Q15008 389 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 EFTUD2Q15029 972 aaKnown RBP eCLIP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 TRIP13Q15645 432 aaPredicted RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 LETM2Q2VYF4 491 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 MDH1BQ5I0G3 518 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 GET4Q7L5D6 327 aaPredicted RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 FASTKD5Q7L8L6 764 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 ANKS1BQ7Z6G8 1248 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 PRPF39Q86UA1 669 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 NLRP10Q86W26 655 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 CHSY1Q86X52 802 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 HELBQ8NG08 1087 aaPredicted RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 RAB3IL1Q8TBN0 382 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 PTCD2Q8WV60 388 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 USP6NLQ92738 828 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 CCDC68Q9H2F9 335 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 MAN1C1Q9NR34 630 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 TAS2R14Q9NYV8 317 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 C6orf203Q9P0P8 240 aaPredicted RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 PPARGC1AQ9UBK2 798 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 GNPTGQ9UJJ9 305 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 RABL2BQ9UNT1 228 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 PRELID1Q9Y255 219 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 GLI3P10071 1580 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 SF3B1O75533 1304 aaKnown RBP eCLIP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 SULT1C4O75897 302 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 ATP5BP06576 529 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 XRCC5P13010 732 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 RRM1P23921 792 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 NR2F2P24468 414 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 HOXD13P35453 343 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 PCYT1AP49585 367 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 PSMC1P62191 440 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 ORC2Q13416 577 aaPredicted RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 NR1D2Q14995 579 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 SF3B3Q15393 1217 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 TMEM119Q4V9L6 283 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 RABGAP1LQ5R372 815 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 VASH1Q7L8A9 365 aaPredicted RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 C11orf74Q86VG3 221 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 EXOC8Q8IYI6 725 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 RTKN2Q8IZC4 609 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 ZCCHC9Q8N567 271 aaKnown RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 CATSPER1Q8NEC5 780 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 SHKBP1Q8TBC3 707 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 TCP10LQ8TDR4 215 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 CTRCQ99895 268 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 CCDC106Q9BWC9 280 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 FGFBP2Q9BYJ0 223 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 NUF2Q9BZD4 464 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 SPATA31A6Q5VVP1 1343 aa10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 COL1A1P02452 1464 aaPredicted RBP10.48□□□□□ -0.73
PDGFRA-207ENST00000509092 LRP5O75197 1615 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 DYTNA2CJ06 578 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 GTPBP10A4D1E9 387 aaKnown RBP10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 TPPPO94811 219 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 PCP11498 1178 aaKnown RBP10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 HSPA13P48723 471 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 EVA1CP58658 441 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 ATP1A4Q13733 1029 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 MESDQ14696 234 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 ZNF394Q53GI3 561 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 IZUMO3Q5VZ72 239 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 KRT25Q7Z3Z0 450 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 TRIML2Q8N7C3 387 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 TSPAN14Q8NG11 270 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 ACTRT2Q8TDY3 377 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 USP33Q8TEY7 942 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 ALKBH8Q96BT7 664 aaKnown RBP10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 OLFM1Q99784 485 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 NUDT12Q9BQG2 462 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 SAYSD1Q9NPB0 183 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 NCKIPSDQ9NZQ3 722 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 KLHL3Q9UH77 587 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 CDH7Q9ULB5 785 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 PCDHB2Q9Y5E7 798 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 PCDHA2Q9Y5H9 948 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 FAM237BA0A1B0GVD1 139 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 ANKRD34BA5PLL1 514 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 ZNF701M0R085 212 aaPredicted RBP10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 CLDN3O15551 220 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 MTA2O94776 668 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 FBXO21O94952 628 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 FXR2P51116 673 aaKnown RBP eCLIP10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 E2F2Q14209 437 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 GK3PQ14409 553 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 OASLQ15646 514 aaKnown RBP10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 KCNJ8Q15842 424 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 DCAF17Q5H9S7 520 aaPredicted RBP10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 ITPRIPL1Q6GPH6 555 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 NANOGP8Q6NSW7 305 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 ZNF713Q8N859 430 aaPredicted RBP10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 TMIGD2Q96BF3 282 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 CCDC85AQ96PX6 553 aaPredicted RBP10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 PLVAPQ9BX97 442 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 SMYD3Q9H7B4 428 aa10.47□□□□□ -0.73
PDGFRA-207ENST00000509092 VPS45Q9NRW7 570 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms