RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 OGTO15294 1046 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 CSH1P0DML2 217 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 CSH2P0DML3 217 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 NMT1P30419 496 aaKnown RBP10.15□□□□□ -0.78
NEDD9-211ENST00000508546 MATR3P43243 847 aaKnown RBP eCLIP10.15□□□□□ -0.78
NEDD9-211ENST00000508546 IRX4P78413 519 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 KRT79Q5XKE5 535 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 NAIF1Q69YI7 327 aaPredicted RBP10.15□□□□□ -0.78
NEDD9-211ENST00000508546 KCNK18Q7Z418 384 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 CYP2U1Q7Z449 544 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 LRRTM3Q86VH5 581 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 RASSF3Q86WH2 238 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 KCTD17Q8N5Z5 321 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 MRPS31Q92665 395 aaKnown RBP10.15□□□□□ -0.78
NEDD9-211ENST00000508546 CNOT6LQ96LI5 555 aaKnown RBP10.15□□□□□ -0.78
NEDD9-211ENST00000508546 CCSER1Q9C0I3 900 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 RPF1Q9H9Y2 349 aaKnown RBP10.15□□□□□ -0.78
NEDD9-211ENST00000508546 KCND2Q9NZV8 630 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 RAXQ9Y2V3 346 aa10.15□□□□□ -0.78
NEDD9-211ENST00000508546 USP9XQ93008 2570 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-211ENST00000508546 PLXNB3Q9ULL4 1909 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 PP2D1A8MPX8 630 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 PATE3B3GLJ2 98 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 LAD1O00515 517 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 PIGRP01833 764 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 SCP2P22307 547 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 U2AF2P26368 475 aaKnown RBP eCLIP10.14□□□□□ -0.795e-7■■■□□ 14.6
NEDD9-211ENST00000508546 CDC25AP30304 524 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 PRPHP41219 470 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 NCKAP1LP55160 1127 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 SIM1P81133 766 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-211ENST00000508546 FAM160A1Q05DH4 1040 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 ST3GAL1Q11201 340 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 LMAN2Q12907 356 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 USP4Q13107 963 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 MTF1Q14872 753 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 UAP1L1Q3KQV9 507 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 HYIQ5T013 277 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 TXNDC8Q6A555 127 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 JADE1Q6IE81 842 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 METTL23Q86XA0 190 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 THEM5Q8N1Q8 247 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 CHCHD4Q8N4Q1 142 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 SYT2Q8N9I0 419 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-211ENST00000508546 TSTD1Q8NFU3 115 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 FBXO18Q8NFZ0 1043 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 USP33Q8TEY7 942 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 OSCP1Q8WVF1 389 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 ATP2A3Q93084 1043 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 BICD1Q96G01 975 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 C8orf76Q96K31 380 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 MMTAG2Q9BU76 263 aaKnown RBP10.14□□□□□ -0.79
NEDD9-211ENST00000508546 TMEM206Q9H813 350 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 DUS2Q9NX74 493 aaKnown RBP10.14□□□□□ -0.79
NEDD9-211ENST00000508546 ABI2Q9NYB9 513 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-211ENST00000508546 LARSQ9P2J5 1176 aaKnown RBP10.14□□□□□ -0.79
NEDD9-211ENST00000508546 UXTQ9UBK9 157 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-211ENST00000508546 NOL7Q9UMY1 257 aaKnown RBP10.14□□□□□ -0.79
NEDD9-211ENST00000508546 DERAQ9Y315 318 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 SHROOM3Q8TF72 1996 aa10.14□□□□□ -0.79
NEDD9-211ENST00000508546 A0A0B4J269 797 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 FAM221BA6H8Z2 402 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 UPK3BL1B0FP48 263 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 UPK3BL2E5RIL1 263 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 CYB561D2O14569 222 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 TADA3O75528 432 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 TCF3P15923 654 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 BCKDHBP21953 392 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 TAF6P49848 677 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 LIG4P49917 911 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 RAD51AP2Q09MP3 1159 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 NR1H3Q13133 447 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 PSMD2Q13200 908 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 NBR1Q14596 966 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 TMEM132DQ14C87 1099 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 ZNF77Q15935 545 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 EML3Q32P44 896 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 DCP1BQ8IZD4 617 aaKnown RBP10.13□□□□□ -0.79
NEDD9-211ENST00000508546 OLIG1Q8TAK6 271 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 LEO1Q8WVC0 666 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-211ENST00000508546 TRMT2BQ96GJ1 504 aaKnown RBP10.13□□□□□ -0.79
NEDD9-211ENST00000508546 MYRFLQ96LU7 910 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 NUSAP1Q9BXS6 441 aaKnown RBP10.13□□□□□ -0.79
NEDD9-211ENST00000508546 TPSD1Q9BZJ3 242 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 SLC32A1Q9H598 525 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 ASB7Q9H672 318 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 SCUBE2Q9NQ36 999 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 CPSF3Q9UKF6 684 aaKnown RBP10.13□□□□□ -0.79
NEDD9-211ENST00000508546 MMP17Q9ULZ9 603 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 INVSQ9Y283 1065 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 C2CD2Q9Y426 696 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 PCDHB5Q9Y5E4 795 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 RAI2Q9Y5P3 530 aa10.13□□□□□ -0.79
NEDD9-211ENST00000508546 PCDH15Q96QU1 1955 aa10.12□□□□□ -0.79
NEDD9-211ENST00000508546 URB1O60287 2271 aaKnown RBP10.12□□□□□ -0.79
NEDD9-211ENST00000508546 H0Y626 953 aa10.12□□□□□ -0.79
NEDD9-211ENST00000508546 TNFRSF10BO14763 440 aa10.12□□□□□ -0.79
NEDD9-211ENST00000508546 HNRNPDLO14979 420 aaKnown RBP10.12□□□□□ -0.79
NEDD9-211ENST00000508546 NOL4O94818 638 aa10.12□□□□□ -0.79
NEDD9-211ENST00000508546 TRIM16O95361 564 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms