RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 U2AF1Q01081 240 aaKnown RBP eCLIP4.3□□□□□ -1.72
AFP-203ENST00000506820 RAB39AQ14964 217 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 GEN1Q17RS7 908 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 UTP14CQ5TAP6 766 aaKnown RBP4.3□□□□□ -1.72
AFP-203ENST00000506820 KAZNQ674X7 775 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 SULT6B1Q6IMI4 303 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 LHFPL2Q6ZUX7 228 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 TOM1L2Q6ZVM7 507 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 UNC5CLQ8IV45 518 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 CCDC146Q8IYE0 955 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 ZGPATQ8N5A5 531 aaKnown RBP4.3□□□□□ -1.72
AFP-203ENST00000506820 FBXL20Q96IG2 436 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 PKNOX2Q96KN3 472 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 CFAP53Q96M91 514 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 PLEKHF1Q96S99 279 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 LRFN3Q9BTN0 628 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 SEMA4GQ9NTN9 838 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 GNL3LQ9NVN8 582 aaKnown RBP4.3□□□□□ -1.72
AFP-203ENST00000506820 POLR2AP24928 1970 aaKnown RBP4.3□□□□□ -1.72
AFP-203ENST00000506820 MAP2P11137 1827 aaKnown RBP4.3□□□□□ -1.72
AFP-203ENST00000506820 RGPD5Q99666 1765 aa4.3□□□□□ -1.72
AFP-203ENST00000506820 OVOS2A0A0G2JMS6 1433 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 NWD2Q9ULI1 1742 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 PRAMEF33A0A0G2JMD5 474 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 A0A1W2PS29 197 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 GRM6O15303 877 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 XPOTO43592 962 aaKnown RBP4.29□□□□□ -1.72
AFP-203ENST00000506820 PRAMEF10O60809 474 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 NDUFS2O75306 463 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 PROP1O75360 226 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 AGFG2O95081 481 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 ANXA1P04083 346 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 SRGNP10124 158 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 KCNA2P16389 499 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 PRKAR2BP31323 418 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 PTH2RP49190 550 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 EVA1CP58658 441 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 SF3B3Q15393 1217 aaKnown RBP4.29□□□□□ -1.72
AFP-203ENST00000506820 FAM9BQ8IZU0 186 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 IL17RDQ8NFM7 739 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 OR2I1PQ8NGU4 316 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 SSH3Q8TE77 659 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 PGBD1Q96JS3 809 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 PDLIM2Q96JY6 352 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 JKAMPQ9P055 326 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 CALCOCO1Q9P1Z2 691 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 PCDHA13Q9Y5I0 950 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 TNFRSF18Q9Y5U5 241 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 RGPD2P0DJD1 1756 aa4.29□□□□□ -1.72
AFP-203ENST00000506820 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.29□□□□□ -1.72
AFP-203ENST00000506820 SALL3Q9BXA9 1300 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 CCDC195A0A1B0GUA6 201 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 WNT10BO00744 389 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 TOR1BO14657 336 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 GNAI3P08754 354 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 CCND1P24385 295 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 SMARCA1P28370 1054 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 SOX10P56693 466 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 GNAI1P63096 354 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 NHLH1Q02575 133 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 WDR43Q15061 677 aaKnown RBP eCLIP4.28□□□□□ -1.72
AFP-203ENST00000506820 FAM153CQ494X1 144 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 DDX42Q86XP3 938 aaKnown RBP eCLIP4.28□□□□□ -1.72
AFP-203ENST00000506820 TCP11L2Q8N4U5 519 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 TOR1AIP2Q8NFQ8 470 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 TMEM125Q96AQ2 219 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 FAXDC2Q96IV6 333 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 UROC1Q96N76 676 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 SMOQ99835 787 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 FOXJ2Q9P0K8 574 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 HSFX1Q9UBD0 423 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.28□□□□□ -1.72
AFP-203ENST00000506820 CDYLQ9Y232 598 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 ATP8A1Q9Y2Q0 1164 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 RRP7AQ9Y3A4 280 aaKnown RBP4.28□□□□□ -1.72
AFP-203ENST00000506820 THSD7AQ9UPZ6 1657 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 RGS12O14924 1447 aa4.28□□□□□ -1.72
AFP-203ENST00000506820 APAF1O14727 1248 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 MYBL2P10244 700 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 FCER1AP12319 257 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 GPD1P21695 349 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 NXPH1P58417 271 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 ITKQ08881 620 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 SLFN5Q08AF3 891 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 DYRK1AQ13627 763 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 HLXQ14774 488 aaPredicted RBP4.27□□□□□ -1.73
AFP-203ENST00000506820 MTHFSDQ2M296 383 aaKnown RBP4.27□□□□□ -1.73
AFP-203ENST00000506820 SYDE2Q5VT97 1194 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 KIAA1614Q5VZ46 1190 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 EGFLAMQ63HQ2 1017 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 VWA1Q6PCB0 445 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 MICALCLQ6ZW33 695 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 TTC7BQ86TV6 843 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 PNMA8AQ86V59 439 aaPredicted RBP4.27□□□□□ -1.73
AFP-203ENST00000506820 B3GALNT2Q8NCR0 500 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 SLC17A8Q8NDX2 589 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 C1orf162Q8NEQ5 155 aaPredicted RBP4.27□□□□□ -1.73
AFP-203ENST00000506820 NTN5Q8WTR8 489 aaPredicted RBP4.27□□□□□ -1.73
AFP-203ENST00000506820 RAPGEF4Q8WZA2 1011 aa4.27□□□□□ -1.73
AFP-203ENST00000506820 SNX19Q92543 992 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms