RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 HMGXB4Q9UGU5 601 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 GTPBP10A4D1E9 387 aaKnown RBP10.06□□□□□ -0.8
PHF3-208ENST00000506783 TRIM49D1C9J1S8 452 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 DGAT1O75907 488 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ARL1P40616 181 aaPredicted RBP10.06□□□□□ -0.8
PHF3-208ENST00000506783 HSDL1Q3SXM5 330 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 MSS51Q4VC12 460 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 COBLL1Q53SF7 1204 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ZNF667Q5HYK9 610 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 DPY19L2P1Q6NXN4 242 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 RFWD3Q6PCD5 774 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ILDR2Q71H61 639 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 NLRP9Q7RTR0 991 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ACOT1Q86TX2 421 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 P3H4Q92791 437 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ZNF317Q96PQ6 595 aaPredicted RBP10.06□□□□□ -0.8
PHF3-208ENST00000506783 PAFAH2Q99487 392 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 DMAC2Q9NW81 257 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 SLC4A7Q9Y6M7 1214 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ASAP2O43150 1006 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ATP9BO43861 1147 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ZBED1O96006 694 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 HSPA6P17066 643 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 GLRA2P23416 452 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 EPHX2P34913 555 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ARFIP2P53365 341 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 POU5F1Q01860 360 aaKnown RBP10.06□□□□□ -0.8
PHF3-208ENST00000506783 OGDHQ02218 1023 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 FAAP100Q0VG06 881 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 PTK7Q13308 1070 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 STXBP2Q15833 593 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 HADHQ16836 314 aaKnown RBP10.06□□□□□ -0.8
PHF3-208ENST00000506783 KBTBD12Q3ZCT8 623 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ZC3H12AQ5D1E8 599 aaKnown RBP10.06□□□□□ -0.8
PHF3-208ENST00000506783 FNBP1LQ5T0N5 605 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 PNPLA1Q8N8W4 532 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 SEC14L1Q92503 715 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ART4Q93070 314 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 SGF29Q96ES7 293 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 DLGAP2Q9P1A6 1054 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.06□□□□□ -0.8
PHF3-208ENST00000506783 CDH23Q9H251 3354 aa10.06□□□□□ -0.8
PHF3-208ENST00000506783 ECM29Q5VYK3 1845 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 COPEO14579 308 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 PRPSAP2O60256 369 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 RASSF9O75901 435 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 FDX1P10109 184 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 KCNA4P22459 653 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 CACNB2Q08289 660 aaPredicted RBP10.05□□□□□ -0.8
PHF3-208ENST00000506783 SEMA3FQ13275 785 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 TMEM132BQ14DG7 1078 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 CLUL1Q15846 466 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 ALYREFQ86V81 257 aaKnown RBP10.05□□□□□ -0.8
PHF3-208ENST00000506783 RNF135Q8IUD6 432 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 USP33Q8TEY7 942 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 DEPDC1BQ8WUY9 529 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 CLEC4DQ8WXI8 215 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 RNF34Q969K3 372 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 SPATA33Q96N06 139 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 GOLGA8QA0A0J9YX86 632 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 GOLGA8OA6NCC3 632 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 GOLGA8NF8WBI6 632 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 PRKCBP05771 671 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 MYL2P10916 166 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 JAK3P52333 1124 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 FOXD4Q12950 439 aaPredicted RBP10.05□□□□□ -0.8
PHF3-208ENST00000506783 THOC5Q13769 683 aaKnown RBP10.05□□□□□ -0.8
PHF3-208ENST00000506783 RCN1Q15293 331 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 ABRAQ8N0Z2 381 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 MCPH1Q8NEM0 835 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 RPS6KC1Q96S38 1066 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 RANBP17Q9H2T7 1088 aaKnown RBP10.05□□□□□ -0.8
PHF3-208ENST00000506783 MAN1C1Q9NR34 630 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 TIMM13Q9Y5L4 95 aaPredicted RBP10.05□□□□□ -0.8
PHF3-208ENST00000506783 B2RBV5 119 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 OPHN1O60890 802 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 GZMAP12544 262 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 TNFRSF8P28908 595 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 POLR2BP30876 1174 aaKnown RBP10.05□□□□□ -0.8
PHF3-208ENST00000506783 GBP1P32455 592 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 GRIA1P42261 906 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 BPIFB4P59827 614 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 GTF2BQ00403 316 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 CCDC142Q17RM4 750 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 DUOXA2Q1HG44 320 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 BMT2Q1RMZ1 405 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 KIZQ2M2Z5 673 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 SPOCD1Q6ZMY3 1216 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 TRMT10CQ7L0Y3 403 aaKnown RBP10.05□□□□□ -0.8
PHF3-208ENST00000506783 CTU1Q7Z7A3 348 aaKnown RBP10.05□□□□□ -0.8
PHF3-208ENST00000506783 ZBTB8OSQ8IWT0 167 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 DNAAF3Q8N9W5 541 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 MCUQ8NE86 351 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 EMID1Q96A84 441 aaPredicted RBP10.05□□□□□ -0.8
PHF3-208ENST00000506783 PGM2Q96G03 612 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 ZNF536O15090 1300 aa10.05□□□□□ -0.8
PHF3-208ENST00000506783 KBTBD13C9JR72 458 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 I3L4J1 428 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 USP1O94782 785 aa10.04□□□□□ -0.8
PHF3-208ENST00000506783 CPP00450 1065 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms