RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 LRRTM3Q86VH5 581 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 OR6B3Q8NGW1 331 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 SPPL2BQ8TCT7 592 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 C2orf15Q8WU43 125 aaKnown RBP14.02□□□□□ -0.17
TCOF1-209ENST00000506630 ZNF512Q96ME7 567 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-209ENST00000506630 SYT15Q9BQS2 421 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 CORO1BQ9BR76 489 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 MRPL45Q9BRJ2 306 aaKnown RBP14.02□□□□□ -0.17
TCOF1-209ENST00000506630 RPP25Q9BUL9 199 aaKnown RBP14.02□□□□□ -0.17
TCOF1-209ENST00000506630 SNX25Q9H3E2 840 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 VRTNQ9H8Y1 702 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 TMEM8AQ9HCN3 771 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.02□□□□□ -0.17
TCOF1-209ENST00000506630 TMLHEQ9NVH6 421 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 ZFP37Q9Y6Q3 630 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-209ENST00000506630 NUMBLQ9Y6R0 609 aa14.02□□□□□ -0.17
TCOF1-209ENST00000506630 DCHS1Q96JQ0 3298 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 VPS13AQ96RL7 3174 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 GABRDO14764 452 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 STX10O60499 249 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 RHOP08100 348 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 PDGFRBP09619 1106 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 P4HA1P13674 534 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 PTPN2P17706 415 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 RAP1GAPP47736 663 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 ALDH1A3P47895 512 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 EPHB3P54753 998 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 STARD6P59095 220 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 PSMC1P62191 440 aaKnown RBP14.01□□□□□ -0.17
TCOF1-209ENST00000506630 RSPO4Q2I0M5 234 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-209ENST00000506630 SGSM1Q2NKQ1 1148 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 CCDC40Q4G0X9 1142 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 KRT39Q6A163 491 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 SPOPLQ6IQ16 392 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 TTI2Q6NXR4 508 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 PDZD4Q76G19 769 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-209ENST00000506630 LIMS2Q7Z4I7 341 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 GPR161Q8N6U8 529 aaKnown RBP14.01□□□□□ -0.17
TCOF1-209ENST00000506630 SUMF1Q8NBK3 374 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 FAM200AQ8TCP9 573 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 GPT2Q8TD30 523 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 TAS1R2Q8TE23 839 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 CEP63Q96MT8 703 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 DUSP9Q99956 384 aaKnown RBP14.01□□□□□ -0.17
TCOF1-209ENST00000506630 BCO2Q9BYV7 579 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 IMPG2Q9BZV3 1241 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 FOXQ1Q9C009 403 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 SMYD3Q9H7B4 428 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 ASAH2Q9NR71 780 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 NCDNQ9UBB6 729 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 ARMCX3Q9UH62 379 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-209ENST00000506630 GTF3C4Q9UKN8 822 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 CDH9Q9ULB4 789 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 PCDHB5Q9Y5E4 795 aa14.01□□□□□ -0.17
TCOF1-209ENST00000506630 PATJQ8NI35 1801 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 LAMTOR5O43504 91 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 TACC1O75410 805 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 ASS1P00966 412 aaKnown RBP14□□□□□ -0.17
TCOF1-209ENST00000506630 LMO2P25791 158 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 GTF2H1P32780 548 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 GNL1P36915 607 aaPredicted RBP14□□□□□ -0.17
TCOF1-209ENST00000506630 TUFMP49411 452 aaKnown RBP14□□□□□ -0.17
TCOF1-209ENST00000506630 NOP14P78316 857 aaKnown RBP14□□□□□ -0.17
TCOF1-209ENST00000506630 NFE2Q16621 373 aaPredicted RBP14□□□□□ -0.17
TCOF1-209ENST00000506630 CCDC142Q17RM4 750 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 SLC5A9Q2M3M2 681 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 ZNF528Q3MIS6 628 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 CCDC150Q8NCX0 1101 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 ITFG1Q8TB96 612 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 ING5Q8WYH8 240 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 TAF4BQ92750 862 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 SECISBP2LQ93073 1101 aaKnown RBP14□□□□□ -0.17
TCOF1-209ENST00000506630 PI4K2AQ9BTU6 479 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 METTL14Q9HCE5 456 aaKnown RBP14□□□□□ -0.17
TCOF1-209ENST00000506630 SPATA6Q9NWH7 488 aaPredicted RBP14□□□□□ -0.17
TCOF1-209ENST00000506630 CEP72Q9P209 647 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 HSFX1Q9UBD0 423 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 FBXO4Q9UKT5 387 aa14□□□□□ -0.17
TCOF1-209ENST00000506630 MRPS23Q9Y3D9 190 aaKnown RBP14□□□□□ -0.17
TCOF1-209ENST00000506630 KANSL1LA0AUZ9 987 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 MYBPHLA2RUH7 354 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 A8MXQ7 604 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 ATP2C2O75185 946 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 HAPLN1P10915 354 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-209ENST00000506630 MYL4P12829 197 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 GLULP15104 373 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 CDH8P55286 799 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 GPC5P78333 572 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 VEPH1Q14D04 833 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 CYP4A22Q5TCH4 519 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 C4orf50Q6ZRC1 276 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 FILIP1Q7Z7B0 1213 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 SPATA2LQ8IUW3 424 aaPredicted RBP13.99□□□□□ -0.17
TCOF1-209ENST00000506630 HS6ST3Q8IZP7 471 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 ATRIPQ8WXE1 791 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 MYLPFQ96A32 169 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 CNTNAP3BQ96NU0 1288 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 PKMYT1Q99640 499 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 LPIN3Q9BQK8 851 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 CNTNAP3Q9BZ76 1288 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms