RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 SHC3Q92529 594 aa14.11□□□□□ -0.15
PDLIM7-212ENST00000504380 TNIP3Q96KP6 325 aa14.11□□□□□ -0.15
PDLIM7-212ENST00000504380 CDCA3Q99618 268 aaPredicted RBP14.11□□□□□ -0.15
PDLIM7-212ENST00000504380 ZSWIM1Q9BR11 485 aa14.11□□□□□ -0.15
PDLIM7-212ENST00000504380 ZNF518BQ9C0D4 1074 aa14.11□□□□□ -0.15
PDLIM7-212ENST00000504380 PCDHB5Q9Y5E4 795 aa14.11□□□□□ -0.15
PDLIM7-212ENST00000504380 MTCL1Q9Y4B5 1905 aaKnown RBP14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 SPDYE4A6NLX3 237 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 PRRG1O14668 218 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 TBX10O75333 385 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 C8AP07357 584 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 HAPLN1P10915 354 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 ELF1P32519 619 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 ZNF75DP51815 510 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 ZNF132P52740 706 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 CLUL1Q15846 466 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 UVSSAQ2YD98 709 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 MGAT5BQ3V5L5 792 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 PPP1R26Q5T8A7 1209 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 TPGS2Q68CL5 300 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 SCN4BQ8IWT1 228 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 FUKQ8N0W3 1084 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 SLC7A14Q8TBB6 771 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 SLC2A14Q8TDB8 520 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 GPR152Q8TDT2 470 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 CYFIP2Q96F07 1278 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 SEPT5Q99719 369 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 STK33Q9BYT3 514 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 TMEM30AQ9NV96 361 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 CLEC1BQ9P126 229 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 CDH22Q9UJ99 828 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 CNTN6Q9UQ52 1028 aa14.1□□□□□ -0.15
PDLIM7-212ENST00000504380 FAM170AA1A519 330 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 F8VZ95 297 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 CCL16O15467 120 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 GFPT2O94808 682 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 CFHP08603 1231 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 TRIM21P19474 475 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 CLCN1P35523 988 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 LTBRP36941 435 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 JAM2P57087 298 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 GOLGA8FQ08AF8 430 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 GOLGA8DPQ0D2H9 430 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 NFE2Q16621 373 aaPredicted RBP14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 DDR2Q16832 855 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 CTC1Q2NKJ3 1217 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 RARS2Q5T160 578 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 ANKRD54Q6NXT1 300 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 CACNA2D4Q7Z3S7 1137 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 FAM35AQ86V20 835 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 FAM71AQ8IYT1 594 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 TTC39CQ8N584 583 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 GIPC2Q8TF65 315 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 CASP10Q92851 521 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 JAKMIP2Q96AA8 810 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 FAM81BQ96LP2 452 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 SPAG5Q96R06 1193 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 CEP72Q9P209 647 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 ARIH1Q9Y4X5 557 aaPredicted RBP14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 YIPF1Q9Y548 306 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 INSL5Q9Y5Q6 135 aa14.09□□□□□ -0.15
PDLIM7-212ENST00000504380 CCDC195A0A1B0GUA6 201 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 H3BQ06 376 aaPredicted RBP14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 THAP12O43422 761 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 ZMYND10O75800 440 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 BEST1O76090 585 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 TPM3P06753 285 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 PAEPP09466 180 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 VDRP11473 427 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 SOX5P35711 763 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 ARID5AQ03989 594 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 TWF1Q12792 350 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 MAPRE1Q15691 268 aaKnown RBP14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 GOLGA7BQ2TAP0 167 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 SGO2Q562F6 1265 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 PPM1LQ5SGD2 360 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 LIN9Q5TKA1 542 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 SYCE2Q6PIF2 218 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 TMC5Q6UXY8 1006 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 TMEM184AQ6ZMB5 413 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 C4orf50Q6ZRC1 276 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 TMC6Q7Z403 805 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 SLC47A2Q86VL8 602 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 VSTM4Q8IW00 320 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 TCEAL8Q8IYN2 117 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 UBA3Q8TBC4 463 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 SPPL2BQ8TCT7 592 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 ATXN2LQ8WWM7 1075 aaKnown RBP14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 BAP1Q92560 729 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 PABPC5Q96DU9 382 aaKnown RBP14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 KCNK16Q96T55 309 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 TTYH3Q9C0H2 523 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 KRT82Q9NSB4 513 aa14.08□□□□□ -0.16
PDLIM7-212ENST00000504380 PTPRDP23468 1912 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 AP1G2O75843 785 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 ATF6P18850 670 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 RFX1P22670 979 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 GNA15P30679 374 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 GRIK1P39086 918 aa14.07□□□□□ -0.16
PDLIM7-212ENST00000504380 STAT1P42224 750 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms