RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 DEF6Q9H4E7 631 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 ADAMTS1Q9UHI8 967 aa21.65■■□□□ 1.06
CDC42SE2-206ENST00000503291 CLDN5O00501 218 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 CPB1P15086 417 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 ADORA2BP29275 332 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 GPR17Q13304 367 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 STILQ15468 1287 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 ASTE1Q2TB18 679 aaPredicted RBP21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 PAQR9Q6ZVX9 377 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 VPS36Q86VN1 386 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 OLIG1Q8TAK6 271 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 MYLPFQ96A32 169 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 RXFP1Q9HBX9 757 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 SEPT11Q9NVA2 429 aaKnown RBP21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 PCDHGC3Q9UN70 934 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 IRAK3Q9Y616 596 aa21.64■■□□□ 1.05
CDC42SE2-206ENST00000503291 DDX3XO00571 662 aaKnown RBP eCLIP21.63■■□□□ 1.059e-7■■■■□ 21.7
CDC42SE2-206ENST00000503291 MICAL2O94851 1124 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 CCZ1BP86790 482 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 CCZ1P86791 482 aaPredicted RBP21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 MRPL43Q8N983 215 aaKnown RBP21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 PCDHB18PQ96TA0 734 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 MED10Q9BTT4 135 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 FNIP2Q9P278 1114 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 EPOPA6NHQ4 379 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 AKR1B10O60218 316 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 NFE2Q16621 373 aaPredicted RBP21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 GOLGA7BQ2TAP0 167 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 PRPF38BQ5VTL8 546 aaKnown RBP21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 PLPP4Q5VZY2 271 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 PALB2Q86YC2 1186 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 PASD1Q8IV76 773 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 SLC30A5Q8TAD4 765 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 PGLYRP2Q96PD5 576 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 KCNF1Q9H3M0 494 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 NGRNQ9NPE2 291 aaKnown RBP21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 PCDHGC5Q9Y5F6 944 aa21.63■■□□□ 1.05
CDC42SE2-206ENST00000503291 A0A087X0T9 212 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 HIDE1A8MVS5 230 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 TEX28O15482 410 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 CNPP09543 421 aaKnown RBP21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 FAM228BP0C875 321 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 IRS1P35568 1242 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 ROR1Q01973 937 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 CREMQ03060 361 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 SMC1AQ14683 1233 aaKnown RBP21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 MTF1Q14872 753 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 DENND1BQ6P3S1 775 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 RAD9BQ6WBX8 426 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 RNF19BQ6ZMZ0 732 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 C4orf50Q6ZRC1 276 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 CCDC170Q8IYT3 715 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 UBA3Q8TBC4 463 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 ZNF518BQ9C0D4 1074 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 HESX1Q9UBX0 185 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 TRIOBPQ9H2D6 2365 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 WDR27A2RRH5 827 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 C2orf71A6NGG8 1288 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 FSCN2O14926 492 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 NRDCO43847 1150 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 KIF11P52732 1056 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 TTC30AQ86WT1 665 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 SPATA2LQ8IUW3 424 aaPredicted RBP21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 ANKRD52Q8NB46 1076 aa21.62■■□□□ 1.05
CDC42SE2-206ENST00000503291 CDH23Q9H251 3354 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 TRANK1O15050 2925 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 M0QYV0 167 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 ANXA13P27216 316 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 NDUFV1P49821 464 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 GFPT1Q06210 699 aaPredicted RBP21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 SMARCB1Q12824 385 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 RAB33AQ14088 237 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 SLC18A3Q16572 532 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 PKDCCQ504Y2 493 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 FAM35AQ86V20 835 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 ATAD1Q8NBU5 361 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 ZNF461Q8TAF7 563 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 GDPD5Q8WTR4 605 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 RHOBTB2Q9BYZ6 727 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 LHX5Q9H2C1 402 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 ZNF576Q9H609 170 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 SPTLC3Q9NUV7 552 aa21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 ABI2Q9NYB9 513 aaPredicted RBP21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 EPN1Q9Y6I3 576 aaPredicted RBP21.61■■□□□ 1.05
CDC42SE2-206ENST00000503291 RFXAPO00287 272 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 CYP1A1P04798 512 aaPredicted RBP21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 BDNFP23560 247 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 PDE12Q6L8Q7 609 aaKnown RBP21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 TRIM72Q6ZMU5 477 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 WDTC1Q8N5D0 677 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 KLHL5Q96PQ7 755 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 EMILIN2Q9BXX0 1053 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 DUSP16Q9BY84 665 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 PCDHB5Q9Y5E4 795 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 FAM170AA1A519 330 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 MTMR11A4FU01 709 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 ABLIM3O94929 683 aa21.6■■□□□ 1.05
CDC42SE2-206ENST00000503291 CYP2F1P24903 491 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms